Colletotrichum gloeosporioides
TaxID: 474922
Basic Information
Colletotrichum gloeosporioides
Anthracnose
Glomerella cingulata is a fungal plant pathogen, being the name of the sexual stage (teleomorph) while the more commonly referred to asexual stage (anamorph) is called Colletotrichum gloeosporioides. For most of this article the pathogen will be referred to as C. gloeosporioides. This pathogen is a significant problem worldwide, causing anthracnose and fruit rotting diseases on hundreds of economically important hosts.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Glomerellales
Glomerellaceae
Colletotrichum
gloeosporioides
nan
Species
nan
k__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Glomerellales;f__Glomerellaceae;g__Colletotrichum;s__Colletotrichum gloeosporioides
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (9 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Angola | Quarantine pests | — |
| Burkina Faso | Present | — |
| Cambodia | Quarantine pests | — |
| Ghana | Quarantine pests | — |
| Myanmar | Quarantine pests | — |
| Mozambique | Quarantine pests | — |
| Nepal | Quarantine pests | — |
| Sudan | Quarantine pests | — |
| Sao Tome and Principe | Quarantine pests | — |
Distribution (78 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Argentina | Present | — |
| Australia | Present | — |
| Austria | Present | — |
| Belgium | Present | — |
| Bangladesh | Present | — |
| Bahamas | Present | — |
| Bermuda | Present | — |
| Bolivia (Plurinational State of) | Present | — |
| Brazil | Present | — |
| Cambodia | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (2 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_011800055.1 | Scaffold | 61 | 429 | 709 | - |
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NFU_CgLc1_1.0 |
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| GCA_002189585.1 | Scaffold | 57 | 183 | 331 | - |
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ASM218958v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR37442369 | - | - | - | 23797406 | China | |
|
PRJNA1431191 SRX32350551 SRP680540 fungi RNA-seq of Colletotrichum gloeosporioides normal RNA-seq of Colletotrichum gloeosporioides {'host': 'citrus', 'sample_type': 'mycelium', 'geo_loc_name': 'China', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-06-10'} |
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| SRR37442368 | - | - | - | 24776705 | China | |
|
PRJNA1431191 SRX32350552 SRP680540 fungi RNA-seq of Colletotrichum gloeosporioides normal RNA-seq of Colletotrichum gloeosporioides {'host': 'citrus', 'sample_type': 'mycelium', 'geo_loc_name': 'China', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-06-11'} |
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| SRR37442367 | - | - | - | 27147725 | China | |
|
PRJNA1431191 SRX32350553 SRP680540 fungi RNA-seq of Colletotrichum gloeosporioides normal RNA-seq of Colletotrichum gloeosporioides {'host': 'citrus', 'sample_type': 'mycelium', 'geo_loc_name': 'China', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-06-12'} |
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DNA Barcodes (419 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| MGEN573-15 | - | ITS | 578 | India | 2014-11-21 | 23.03294, 72.62842 | |
| MGEN476-15 | - | ITS | 580 | India | 2014-11-21 | 23.03294, 72.62842 | |
| MGEN127-14 | - | ITS | 322 | India | 2013-08-27 | 23.15535, 72.77888 | |
| MGEN041-14 | - | ITS | 322 | India | 2013-09-12 | 23.14458, 72.39358 | |
| GBGLO999-13 | - | ITS | 574 | India | - | 23.5863, 81.173004 | |
| GBGLO998-13 | - | ITS | 574 | - | - | - | |
| GBGLO997-13 | - | ITS | 574 | - | - | - | |
| GBGLO996-13 | - | ITS | 574 | - | - | - | |
| GBGLO995-13 | - | ITS | 574 | - | - | - | |
| GBGLO983-13 | - | ITS | 549 | - | - | - |
Literature
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Failed to fetch literature