Sida spinosa
TaxID: 108380
Basic Information
Sida spinosa
Indian mallow, Prickly Mallow
Sida spinosa, the prickly fanpetals, is a widespread species of flowering plant in the family Malvaceae. It is native to the seasonally dry tropics and subtropics, including Latin America, the Caribbean, Africa, Madagascar, parts of the Middle East, and the Indian Subcontinent, and it has been introduced to many other locales. A subshrub or herb 0.2 to 1.0 m (8 to 39 in) high, it is typically found in disturbed situations such as roadsides and pastures.
from Wikipedia
Taxonomic Information
Eukaryota
Streptophyta
Magnoliopsida
Malvales
Malvaceae
Sida
spinosa
Unclassified
Species
nan
d__Eukaryota;p__Streptophyta;c__Magnoliopsida;o__Malvales;f__Malvaceae;g__Sida;s__Sida spinosa
nan
Weeds
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (4 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Georgia | Absent | 2018 |
| Israel | Quarantine pest | 2009 |
| Jordan | A1 list | 2013 |
| Uzbekistan | A1 list | 2008 |
Distribution (70 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Antigua and Barbuda | Present | — |
| Anguilla | Present | — |
| Argentina | Present | — |
| Australia | Present | — |
| Belgium | Present | — |
| Benin | Present | — |
| Burkina Faso | Present | — |
| Bahamas | Present | — |
| Bolivia (Plurinational State of) | Present | — |
| Brazil | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (0 records)
Data source: NCBI.
No genome records available.
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR18218740 | Leaf | not collected | - | 22995904 | not applicable | |
|
PRJNA812771 SRX14365169 SRP362448 weed RNA-Seq of Sida spinosa: leaf Library construction involved enriching mRNA using oligo(dT) beads and removal of rRNA using Ribo-Zero kit. Subsequently, mRNA was fragmented and followed by first- and second- strand cDNA synthesis. Finally, cDNA libraries were generated through adaptor ligation and PCR enrichment. Libraries that passed QC were sequenced on a NovaSeq 6000 Sequencing System using NovaSeq paired end 150 sequencing setting. Angustifolia {'age': '6 weeks', 'tissue': 'Leaf', 'cultivar': 'Angustifolia', 'dev_stage': 'not collected', 'treatment': 'Non-infected', 'sample_type': 'Tissue sample', 'collected_by': 'University of Georgia', 'biosamplemodel': 'Plant', 'collection_date': '2020-08', 'specimen_voucher': 'Library-8', 'biomaterial_provider': 'Rajagopalbabu Srinivasan'} |
||||||
| SRR18218739 | Leaf | not collected | - | 23352855 | not applicable | |
|
PRJNA812771 SRX14365170 SRP362448 weed RNA-Seq of Sida spinosa: leaf Library construction involved enriching mRNA using oligo(dT) beads and removal of rRNA using Ribo-Zero kit. Subsequently, mRNA was fragmented and followed by first- and second- strand cDNA synthesis. Finally, cDNA libraries were generated through adaptor ligation and PCR enrichment. Libraries that passed QC were sequenced on a NovaSeq 6000 Sequencing System using NovaSeq paired end 150 sequencing setting. Angustifolia {'age': '6 weeks', 'tissue': 'Leaf', 'cultivar': 'Angustifolia', 'dev_stage': 'not collected', 'treatment': 'Non-infected', 'sample_type': 'Tissue sample', 'collected_by': 'University of Georgia', 'biosamplemodel': 'Plant', 'collection_date': '2020-08', 'specimen_voucher': 'Library-9', 'biomaterial_provider': 'Rajagopalbabu Srinivasan'} |
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| SRR18218738 | Leaf | not collected | - | 20107076 | not applicable | |
|
PRJNA812771 SRX14365171 SRP362448 weed RNA-Seq of Sida spinosa: leaf Library construction involved enriching mRNA using oligo(dT) beads and removal of rRNA using Ribo-Zero kit. Subsequently, mRNA was fragmented and followed by first- and second- strand cDNA synthesis. Finally, cDNA libraries were generated through adaptor ligation and PCR enrichment. Libraries that passed QC were sequenced on a NovaSeq 6000 Sequencing System using NovaSeq paired end 150 sequencing setting. Angustifolia {'age': '6 weeks', 'tissue': 'Leaf', 'cultivar': 'Angustifolia', 'dev_stage': 'not collected', 'treatment': 'Non-infected', 'sample_type': 'Tissue sample', 'collected_by': 'University of Georgia', 'biosamplemodel': 'Plant', 'collection_date': '2020-08', 'specimen_voucher': 'Library-10', 'biomaterial_provider': 'Rajagopalbabu Srinivasan'} |
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DNA Barcodes (27 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| SIDA033-14 | - | trnH-psbA | 468 | India | - | 23.5863, 81.173004 | |
| SIDA033-14 | - | rbcL | 607 | India | - | 23.5863, 81.173004 | |
| SIDA033-14 | - | matK | 828 | India | - | 23.5863, 81.173004 | |
| SIDA033-14 | - | ITS2 | 456 | India | - | 23.5863, 81.173004 | |
| SIDA032-14 | - | trnH-psbA | 468 | India | - | 23.5863, 81.173004 | |
| SIDA032-14 | - | rbcL | 607 | India | - | 23.5863, 81.173004 | |
| SIDA032-14 | - | matK | 828 | India | - | 23.5863, 81.173004 | |
| SIDA032-14 | - | ITS2 | 456 | India | - | 23.5863, 81.173004 | |
| SAFH4080-12 | - | rbcLa | 520 | South Africa | 2011-11-15 | -26.718, 27.061 | |
| SAFH4080-12 | - | matK | 826 | South Africa | 2011-11-15 | -26.718, 27.061 |
Literature
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