Pratylenchus coffeae

TaxID: 45937

Basic Information

Scientific Name *

Common Name

Bananenwortellesieaaltje, Root Lesion Nematode

Introduction

Pratylenchus coffeae is a plant-pathogenic nematode infecting several hosts including potato, banana, sweet potato, strawberry, Persian violet, peanut and citrus. It has the smallest known genome of any animal.

from Wikipedia

Taxonomic Information

Domain/Kingdom

Eukaryota

Phylum

Nematoda

Class

Chromadorea

Order

Rhabditida

Family

Pratylenchidae

Genus

Pratylenchus

Species

coffeae

Subspecies

-

Photos (0 photos)

No photos available.

Morphological Features

No morphological description available.

Host Plants (7 host plants)

Data sources: EPPO Global Database and relevant literature.

Scientific Name	Status
Aroideae	Host
Coffea	Host
Cucurbitaceae	Host
Curcuma longa	Host
Musa	Host
Musa x paradisiaca	Host
Sesamum indicum	Host

Quarantine Status (14 records)

Data sources: IPPC website and national quarantine websites; verified by human review.

Country	Status	Year Added
Argentina	Absent	2019
Burkina Faso	Absent	—
Bahrain	Quarantine pests	2003
Chile	Quarantine pests	2019
Guinea	Quarantine pests	2022
Indonesia	Present	—
Morocco	Quarantine pest	2018
Mexico	Quarantine pests	2018
Oman	Absent	—
Paraguay	Quarantine pests	—

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Distribution (76 countries)

Data Sources: EPPO Global Database and GBIF.

75

Present

1

Absent

0

Unknown/Other

Country	Status	State
Afghanistan	Present	—
Australia	Present
Bangladesh	Present	—
Bulgaria	Present	—
Belize	Present	—
Brazil	Present
Barbados	Present	—
Brunei Darussalam	Present	—
Bhutan	Present	—
Chile	Present	—

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Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

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Genomes (0 records)

Data source: NCBI.

No genome records available.

Transcriptomes (0 records)

Data source: NCBI.

No transcriptome records available.

DNA Barcodes (66 records)

View all

Data source: BOLD.

Process ID	BIN	Marker	Length	Country	Date	Lat/Lon	Sequence
GBNM5210-19	-	COI-3P	414	-	-	-	GATTTTTTGGGCATCCTGAAGTCTATGTATTGATTGCTCCTGCTTTTGGTTTGGTTAGATTATCATGTCAATTGCTTTCTTCTAAACTGGAGCTTTTTAGTGTTAAAGGTTTAATTGGAGCTATTCAAGGTATTGGTTTTGTAGGTTGTTTAGTTTGGGCCCATCATATGTTTGTAATTGGTATGGATGGTGATTCTCGGGCTTATTTTTCTACTGCTACTATGGTTATTGCTATCCCAACTGGGATAAAGGTTTTTAGTTGATTAATGAGTCTTTTTGGTTTAATTTTGTTTTCTAGTATTTTGGTATTGTGGTGTTTGTGTTTTGTTTTTTTATTCACTGTCGGGGGTCTTTCTGGTCTTGTTTTGAGAAATTCAAGTTTGGATTTATTTCTTCATGATACTTATTATGTAG
GBNEM7849-23	-	18S-5P	557	Japan	-	26.417, 127.8168	CAGTAGTCATAT-----------GCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACA---TACT---T--TTAC---------ATAGTGAAACCGCGAATGGCTCATTA-AATCAGTTATGGTTCCTTAGATCGTA--------C--AATCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGAAGCAC-GGCTCTGACCTCGC-GG--------AAA---------------------------------------------------GAGCGCGTTTATTAGATCAA--AACCAGTCGG---------------------------------------------------------------------------------------------------GTT-C-G-CAAGGGCCCGTCGGATTGG---TGAGACTGGATA---ACTTTGTGC----TGATCGCACGG--C--CTCGCGCCGGCGACGTATC-TTTCAAATGTCTGCCCTATCAAC-TTTCGATGGT-----ACGTGATATGCCTACCATGGT-TGTAACGGGTAACGGG---GAATCGGGGTTCGATTCCGGAGAGGGA--GCATGAGAAACGGCTACCACATCCAAGGAAGGCAGCA--GGCGCGC-AAATTACCCACTCCTGG-CACGGGGAGGTAGTGACGAAAAATAACAATACGGGACTCTTT-----------CGAGGCCCCGTA-ATTGGAATGAGTACACTTTAAACCCTTTAACG--AGGA---------TCTATTGGAGGGCAAGTCTGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GBNEM7848-23	-	18S-5P	570	Japan	-	26.417, 127.8168	CTGGTTGATCCTG------CCAGTAGTCATAT-----------GCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACA---TACT---T--TTAC---------ATAGTGAAACCGCGAATGGCTCATTA-AATCAGTTATGGTTCCTTAGATCGTA--------C--AATCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGAAGCAC-GGCTCTGACCTCGC-GG--------AAA---------------------------------------------------GAGCGCGTTTATTAGATCAA--AACCAGTCGG---------------------------------------------------------------------------------------------------GTC-C-G-CAAGGGCCCGTCGGATTGG---TGAGACTGGATA---ACTTTGTGC----TGATCGCACGG--C--CTCGCGCCGGCGACGTATC-TTTCAAATGTCTGCCCTATCAAC-TTTCGATGGT-----ACGTGATATGCCTACCATGGT-TGTAACGGGTAACGGG---GAATCAGGGTTCGATTCCGGAGAGGGA--GCATGAGAAACGGCTACCACATCCAAGGAAGGCAGCA--GGCGCGC-AAATTACCCACTCCTGG-CACGGGGAGGTAGTGACGAAAAATAACAATACGGGACTCTTT-----------CGAGGCCCCGTA-ATTGGAATGAGTACACTTTAAACCCTTTAACG--AGGA---------TCTATTGGAGGGCAAGTCTGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GBNEM7847-23	-	18S-5P	586	Japan	-	-	TCTAGAGCTAATACATGCAGCAGAACTCGGACCTTCGGG-G--------------------------------------------------------------------ACGAGTGCTT-TTATTAGACCAAGACCAATCGGGCTTCG--------------------------------------------------------------------------GCCCGAC-ACTT--GTGGCGACTCTGGATAACTTTGG---GCTGATCGC-A-CGATCTCGT--ATCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTTTCTT-TCAAGTGTCTGCCTTATCAACTT-TCGATGGTAG-GTTATGCGCCTACCATGGTCGTAACGGGTGAC-GGGGAATCAGGGTTCGATTCCGGAGAGGGA-GCCTG--AGAAACGGCT-----ACCACATCCAAGGAAGGC-AGCAGGC--GCGCAAATTACCCACTCCCGG-CACGGGG------------AGGTAGTGACGAAAAATAA--CAATACGGGACT----CT-TTTGAGGCCCCGTAATTGGAATGAGTACACTCTAAA-TCCTT-TAA---CGAGGATCCATT-GGAGGGCAAGTC-----TGGTG-CCAGCAGCCGCGGTAA-TTCCAGCTC--CAATAGCG-----TATATTAA-AGTT--GTTGC-GGTT----AAAAGCTC-GT-AGTTGGA---TCTCAGTTCGAGGCTGGCGGTCCACCGTTCGGTGGCTACTGCCTAG--CGCTCA-------------------------------------AC-ATCCTGC-------------CGG-------TTTTC---------------CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTGCTCTT-CATTG-AGTG-----TCTCGGGT
GBNEM7846-23	-	18S-5P	586	Japan	-	-	TCTAGAGCTAATACATGCAGCAGAACTCGGACCTTCGGG-G--------------------------------------------------------------------ACGAGTGCTT-TTATTAGACCAAGACCAATCGGGCTTCG--------------------------------------------------------------------------GCCCGAC-ACTT--GTGGCGACTCTGGATAACTTTGG---GCTGATCGC-A-CGATCTCGT--ATCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTTTCTT-TCAAGTGTCTGCCTTATCAACTT-TCGATGGTAG-GTTATGCGCCTACCATGGTCGTAACGGGTGAC-GGGGAATCAGGGTTCGATTCCGGAGAGGGA-GCCTG--AGAAACGGCT-----ACCACATCCAAGGAAGGC-AGCAGGC--GCGCAAATTACCCACTCCCGG-CACGGGG------------AGGTAGTGACGAAAAATAA--CAATACGGGACT----CT-TTTGAGGCCCCGTAATTGGAATGAGTACACTCTAAA-TCCTT-TAA---CGAGGATCCATT-GGAGGGCAAGTC-----TGGTG-CCAGCAGCCGCGGTAA-TTCCAGCTC--CAATAGCG-----TATATTAA-AGTT--GTTGC-GGTT----AAAAGCTC-GT-AGTTGGA---TCTCAGTTCGAGGCTGGCGGTCCACCGTTCGGTGGCTACTGCCTAG--CGCTCA-------------------------------------AC-ATCCTGC-------------CGG-------TTTTC---------------CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTGCTCTT-CATTG-AGTG-----TCTCGGGT
GBNEM7845-23	-	18S-5P	273	China	-	-	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGCAACTTACCCACTCTCGGCGAGAGGAGGTAGTAAAGACAAATATCGAT---ACAGAACTCT--TATGAGGTACTGTAATCGAAATGAGTGCATTATAAATCCTACAACAAGGATCTATT-GGAGGGCAAGTCTGGTG-CCAGCAG---CCGCGGTAA----CTCCAGCTCCAATAGCATATATTAAAATTGCTGC-AGTTAAAAAGCT-CGTAG-TTGGATCTGG-GTTCTGGTT-TGGAGACTGCTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------CT-----TAGTG--------A-A--------------------------------------------------------T---TGA---------T---TTC---ATGAAGCTTTG-----GGCAGCGGT
GBNEM7844-23	-	18S-5P	684	China	-	-	---------------------------------------------------------------GCGAATGGCTCATTAAATCAGCTATGGTTTACTGGACCGTAC------CCGTTAAATGGATAACTGTAATAACTCTAGAGCTAATACATGCAACTATGCCCTGAACCGAAAGGCAA------GGGGT-----------------------------------------------------------------GCACTTAT-TAGATCAGAAGCCAACCGGGTGTC------------------------------------GGTCGCAAGGCCGGCGCCTGTTGTCGTTTTGGTGACTCTGGATAATTGTTACAGATCGCAGTCGG--CCATGAGTCGGCGACGGGTCCTCCAAATGTCTGCCCTATCA-ACTTTCGATGGTAGGTGACCTGCCTACCATGGTGATAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACTTCCAAGGGAGGCAGCAGGCGCGCAAATTACCCACTCCCAGCACGGGGAGGTGGTGACGAAAAATACCGAT---GCGGGACTCCCAAACGAGGCTCCGTAATCGGAATGAGTCGACTATAAATCCTTTAACGAGGATCAATT-GGAGGGCAAGTCTGGTG-CCAGCAG---CCGCGGTAA----CTCCAGCTCCAATAGCGTATATTAAAGTTGCTGC-AGTTAAAAAGCT-CGTAG-TTGGATCTCGGTATCATTGT-TGCCTGCTGGCCTTAGAGGCGTTCGCTGGCCTAGCGGTGCA-----------------TGGGTGAGCCT-----G---------------------------------------------------------------------------------TG--------------TA------------TCGTGTGGT--CGGCAGCT----------T-----TGGG--------------------------------TCGGTGTGGCGGC
GBNEM7843-23	-	18S-5P	577	China	-	-	---------------------------------------------------------------------------------------------------------------------------------------------------TACATGCAACAATGCCC-AACC-CTCACGGGAAGGG-----------------------------------------------------------------------TGCACTTAT-TAGATCAAGACCAACCGGG--TTTCG------------------------------------G---CTCGAAGTT-------------TTGATGACTCTGGATAATTGT----TTCGATCGCACGGCCTTTGTGTCGGCGACGTTTCTTTCAAATGTCTGCCCTATCA-ACTATAGATGGTAGATAAATTGTCTACCATGGTGATAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACAGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCTCAAAACGAGGAGGTAGTGACAATAAATAACGAT---GCGGGACTCA-A-TCGAGGCCCCGTAATCGGAATGAGTACACTTTAAATCCTTTAACGAGGATCAATT-GGAGGGCAAGTCTGGTG-CCAGCAG---CCGCGGTAA----TTCCAGCTCCAATAGCGTATATTAAAGTTGTTGC-AGTTAAAAAGCT-CGTAG-TTGGATCTAAGGATTTGGAC-GGATGGTACGCTTTAGGGTGTCACTGTCTGT------CTGGCC---------------TATATTAGTCG-----------------------------------TGGAAGCCTTTAGTGCTC----------TTCATT------------GAGTGCTTTGGGTGC
GBNEM7842-23	-	18S-5P	548	Japan	-	-	-----TTGTCTCAAAGATTAAGCCATGCATGTCTCAGTACAAG-CCAA-----ATTAAGGTGAAACCGCGAA-AGGCTCATTA---AATCAGTTATGGTTCCTTAGATCGTAC---------------------CCACACTTACTTGGATAAC--TGTGGTAATTCTAGAGCTAATACATGCAAACAGAGCTCCG-ACCGGAGACG---------------------------------------------------------GAA----GGAGCGCTTTTATTAGATCAAAACCAATCGGTGGCGGG-TTCG-------------------------------------------------------CTCGTT--CATCGTA-TAACTTGG------TGACTCTGAATAACTT----TAAGCTGATCGCACGGTCTA-GCACCGGCGACGCATCTT-TCAAATGTCTGCCTTATC-AACTGTCGATGGTAGGTTC-TGCGCCTACCATGGTC-----GT-AACGGGTAACGGGG---AATCAGGGTTCGA--TTCCGGAGA---G-GGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCG----CAAATTAC-CCACTCCCGGCACG-GGGAGGTA--GTGACGAAAAATAACGATACGGGACTCATCCGAGG-CCCCGTAAT----CGGAATGAGTACACTCTAAACC--------CTTTA-ACGAGGATCAATTGG-AGGGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GBNEM7841-23	-	18S-5P	245	China	-	-	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGTAGTAAAGATAAATATCGAT---ACAGAACTCT--AATGAGGTACTGTAATCGAAATGAGTGCATTATAAATCCTACAACGAGGATCTATT-GGAGGGCAAGTCTGGTG-CCAGCAG---CCGCGGTAA----CTCCAGCTCCAATAGCATATATTAAAATTGCTGC-AGTTAAAAAGCT-CGTAG-TTGGATCTGG-GTTCTGGTC-TGGAACATCTCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------TA-----ATATA--------A-T--------------------------------------------------------G---AAA---------T--TCA------TTTATTAGA-----TCTTG-GTTTAT

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Pratylenchus coffeae

Basic Information

Taxonomic Information

Photos (0 photos)

Morphological Features

Host Plants (7 host plants)

Quarantine Status (14 records)

Distribution (76 countries)

Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

Genomes (0 records)

Transcriptomes (0 records)

DNA Barcodes (66 records)

Literature

State Information