Alopecurus myosuroides
TaxID: 81473
Basic Information
Alopecurus myosuroides
Black-grass
Alopecurus myosuroides is an annual grass, native to Eurasia, found in moist meadows, deciduous forests, and on cultivated and waste land. It is also known as slender meadow foxtail, black-grass, twitch grass, and black twitch.
from Wikipedia
Taxonomic Information
Eukaryota
Streptophyta
Magnoliopsida
Poales
Poaceae
Alopecurus
myosuroides
Unclassified
Species
nan
d__Eukaryota;p__Streptophyta;c__Magnoliopsida;o__Poales;f__Poaceae;g__Alopecurus;s__Alopecurus myosuroides
nan
Weeds
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (7 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (55 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Afghanistan | Present | — |
| Albania | Present | — |
| Argentina | Present | — |
| Armenia | Present | — |
| Australia | Present | — |
| Austria | Present | — |
| Azerbaijan | Present | — |
| Belgium | Present | — |
| Bulgaria | Present | — |
| Canada | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_028641055.1 | Chromosome | 3571 | 1821 | 522029 | - |
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Alomy_genome_v1 |
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Transcriptomes (6 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR26036857 | leaf | vegetative growth | - | 36019283 | United Kingdom | |
|
PRJNA1009248 SRX21753990 SRP459845 weed RNAseq of Alopecurus myosuroides Lola103: waterlogged rep 3 RNA extracted from Alopecurus myosuroides Lola103 leaf: waterlogged {'age': '33 days', 'tissue': 'leaf', 'ecotype': 'Lola103', 'dev_stage': 'vegetative growth', 'replicate': '3', 'treatment': 'waterlogged', 'sample_type': 'tissue sample', 'geo_loc_name': 'United Kingdom', 'biosamplemodel': 'Plant', 'collection_date': '2022-10-18'} |
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| SRR26036856 | leaf | vegetative growth | - | 34229584 | United Kingdom | |
|
PRJNA1009248 SRX21753991 SRP459845 weed RNAseq of Alopecurus myosuroides Lola103: waterlogged rep 4 RNA extracted from Alopecurus myosuroides Lola103 leaf: waterlogged {'age': '33 days', 'tissue': 'leaf', 'ecotype': 'Lola103', 'dev_stage': 'vegetative growth', 'replicate': '4', 'treatment': 'waterlogged', 'sample_type': 'tissue sample', 'geo_loc_name': 'United Kingdom', 'biosamplemodel': 'Plant', 'collection_date': '2022-10-18'} |
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| SRR26036855 | leaf | vegetative growth | - | 36057573 | United Kingdom | |
|
PRJNA1009248 SRX21753992 SRP459845 weed RNAseq of Alopecurus myosuroides Lola103: waterlogged rep 5 RNA extracted from Alopecurus myosuroides Lola103 leaf: waterlogged {'age': '33 days', 'tissue': 'leaf', 'ecotype': 'Lola103', 'dev_stage': 'vegetative growth', 'replicate': '5', 'treatment': 'waterlogged', 'sample_type': 'tissue sample', 'geo_loc_name': 'United Kingdom', 'biosamplemodel': 'Plant', 'collection_date': '2022-10-18'} |
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| SRR28826863 | Cell culture | Cell culture | - | 78313213 | United Kingdom | |
|
PRJNA1105767 SRX24389776 SRP504551 general RNA-seq of Alopecurus myosuroides: Cell culture RNA-seq of Alopecurus myosuroides: Cell culture {'tissue': 'Cell culture', 'ecotype': 'Rothamsted', 'dev_stage': 'Cell culture', 'replicate': '5', 'timepoint': '1h', 'treatment': 'Cloq', 'geo_loc_name': 'United Kingdom', 'biosamplemodel': 'Plant', 'collection_date': '2019'} |
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| SRR28826862 | Cell culture | Cell culture | - | 76396967 | United Kingdom | |
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PRJNA1105767 SRX24389777 SRP504551 general RNA-seq of Alopecurus myosuroides: Cell culture RNA-seq of Alopecurus myosuroides: Cell culture {'tissue': 'Cell culture', 'ecotype': 'Rothamsted', 'dev_stage': 'Cell culture', 'replicate': '5', 'timepoint': '6h', 'treatment': 'Cloq', 'geo_loc_name': 'United Kingdom', 'biosamplemodel': 'Plant', 'collection_date': '2019'} |
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| SRR28826856 | Cell culture | Cell culture | - | 70208454 | United Kingdom | |
|
PRJNA1105767 SRX24389783 SRP504551 general RNA-seq of Alopecurus myosuroides: Cell culture RNA-seq of Alopecurus myosuroides: Cell culture {'tissue': 'Cell culture', 'ecotype': 'Rothamsted', 'dev_stage': 'Cell culture', 'replicate': '1', 'timepoint': '6h', 'treatment': 'Cloq', 'geo_loc_name': 'United Kingdom', 'biosamplemodel': 'Plant', 'collection_date': '2019'} |
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DNA Barcodes (44 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| POWNA1017-12 | - | rbcL | 542 | United Kingdom | 1994-06-17 | 51.597244, -2.7809939999999997 | |
| POWNA029-10 | - | rbcL | 542 | United Kingdom | 1997-05-25 | 51.794594, -2.782224 | |
| POEUA017-12 | - | rbcLa | 553 | Russia | 2007-06-08 | - | |
| POEUA016-12 | - | rbcLa | 553 | Russia | 2001-05-05 | - | |
| POEUA015-12 | - | rbcLa | 553 | Russia | 2001-05-05 | - | |
| POEUA014-12 | - | rbcLa | 553 | Russia | 2002-05-22 | - | |
| POEUA013-12 | - | rbcLa | 553 | Russia | 2001-05-20 | - | |
| PLGE141-13 | - | rbcL | 549 | Switzerland | 2012-07-12 | - | |
| PCUBC851-14 | - | rbcLa | 552 | United States | 1891-05-23 | - | |
| PCUBC767-14 | - | ITS2 | 340 | United States | 1882-07-21 | - |
Literature
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