Convolvulus arvensis

RNA-Seq of Convolvulus arvensis: pollen

The total RNA-Seq library was created by the Genomics Research Core (GRC) at the University of Pittsburgh (Pittsburgh, PA). The GRC performed TruSeq stranded total RNA library preparation using an Illumina RiboZero Plant Leaf Kit.

{'age': 'not collected', 'temp': '72F', 'tissue': 'pollen', 'isolate': '4151 - 4173 Fries Road, Linesville, PA population', 'lat_lon': '41.6188 N 80.4441 W', 'cell_type': 'vegetative/reproductive plant cells', 'dev_stage': 'flowering/reproductive maturity/anther dehiscence', 'treatment': 'the 30 - 50 mg collected pollen was stored at -80C until total RNA extraction', 'sample_type': 'tissue', 'collected_by': 'Andrea Fetters (University of Pittsburgh) and Abigail Jarrett', 'geo_loc_name': 'USA: Pennsylvania', 'biosamplemodel': 'Plant', 'collection_date': '2018-08-07', 'isolation_source': 'Region in the Eastern Temperate Forest where forest fragments merge with large-scale agricultural fields'}

Illumina HiSeq 2000 paired end sequencing

{'sequencer': 'HiSeq', 'external id': 'SAMEA104170657', 'sample name': 'CPOC', 'tissue type': 'leaves and stems', 'insdc status': 'public', 'submitter id': 'CPOC', 'source_mat_id': 'Stewart and Burris', 'ena last update': '2017-07-23', 'ena first public': '2017-07-23', 'insdc center name': 'Department of Biological Sciences', 'insdc last update': '2017-07-23T05:36:35Z', 'insdc center alias': 'Department of Biological Sciences', 'insdc first public': '2017-07-23T17:01:29Z'}

RNA-seq of Convolvulus arvensis

phylogenetic and whole genome duplication studies of the asterids

{'tissue': 'leaves', 'biosamplemodel': 'Plant', 'specimen_voucher': 'FUS:Hong Ma L81', 'biomaterial_provider': 'Bonn University Botanical Garden'}

Illumina HiSeq 4000 paired end sequencing

Illumina sequencing of sample accession SAMEA7522009 for study accession PRJEB76344. This submission includes reads tagged with the sequence ACGTAACA.

{'gal': 'Royal Botanic Gardens Kew', 'sex': 'hermaphrodite and monoecious', 'tolid': 'daConArve2', 'habitat': 'garden weed', 'lifestage': 'vegetative structure', 'broker name': 'COPO', 'external id': 'SAMEA7522009', 'sample name': '5fa2a9207b7818000114506e', 'specimen id': 'KDTOL 10029', 'collected by': 'MAARTEN J. M. CHRISTENHUSZ', 'insdc status': 'public', 'project name': 'DTOL', 'submitter id': '5fa2a9207b7818000114506e', 'identified by': 'Maarten J. M. Christenhusz', 'organism part': 'LEAF', 'collection date': '2020-08-10', 'ena-last-update': '2021-07-02T15:18:31Z', 'scientific_name': 'Convolvulus arvensis', 'ena-first-public': '2020-11-04T14:42:39Z', 'specimen voucher': 'NOT PROVIDED', 'insdc center name': 'EarlhamInstitute', 'insdc last update': '2021-07-02T15:18:31Z', 'insdc first public': '2020-11-04T14:42:39Z', 'sample derived from': 'SAMEA7521938', 'collecting institution': 'ROYAL BOTANIC GARDENS KEW', 'identifier_affiliation': 'Independent', 'geographic location (latitude)': '51.4262', 'geographic location (elevation)': '10', 'geographic location (longitude)': '-0.3003', 'geographic location (country and/or sea)': 'United Kingdom', 'geographic location (region and locality)': 'Surrey | Kingston upon Thames | Wolsey Drive | Tudor Allotment Association.'}