Ceratocystis fimbriata
TaxID: 5158
Basic Information
Ceratocystis fimbriata
Blight of Mango, Rapid ohia death/ohia wilt
Ceratocystis fimbriata is a fungus and a plant pathogen, attacking such diverse plants as the sweet potato (black rot) and the tapping panels of the Para rubber tree (moldy rot). It is a diverse species that attacks a wide variety of annual and perennial plants. There are several host-specialized strains, some of which, such as Ceratocystis platani that attacks plane trees, are now described as distinct species.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Microascales
Ceratocystidaceae
Ceratocystis
fimbriata
Undefined
Species
nan
d__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Microascales;f__Ceratocystidaceae;g__Ceratocystis;s__Ceratocystis fimbriata
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (13 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Actinidia chinensis | Host |
| Ananas comosus | Host |
| Camellia sinensis var. assamica | Host |
| Coffea | Host |
| Cupressus sempervirens | Host |
| Dalbergia sissoo | Host |
| Dimocarpus longan | Host |
| Eucalyptus | Host |
| Gmelina arborea | Host |
| Hevea brasiliensis | Host |
Quarantine Status (13 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Cambodia | Quarantine pests | — |
| Chile | Quarantine pests | 2019 |
| Egypt | Abesent | 2018 |
| Indonesia | Absent | — |
| Israel | Quarantine pest | 2009 |
| Mozambique | Quarantine pests | — |
| Nepal | Quarantine pests | — |
| Pakistan | Quarantine pests | — |
| Paraguay | Quarantine pests | — |
| Russian Federation | A1 list | 2014 |
Distribution (56 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| American Samoa | Present | — |
| Australia | Present | — |
| Brazil | Present | — |
| Brunei Darussalam | Present | — |
| Cambodia | Present | — |
| Canada | Present | — |
| China | Present | |
| Côte d'Ivoire | Present | — |
| Democratic Republic of the Congo | Present | — |
| Colombia | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_009914735.1 | Scaffold | 31 | 173 | 181 | - |
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ASM991473v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR36356569 | - | - | - | 22417724 | China: Sichuan Province, HuiLi City | |
|
PRJNA1377537 SRX31385831 SRP653309 fungi RNA-Seq of Ceratocystis fimbriata: mycelium mRNA was enriched using Oligo(dT) magnetic beads. F1 {'strain': 'Ceratocystis fimbriata strain F1', 'isolate': 'F1', 'lat_lon': '26.65 N 102.24 E', 'replicate': 'replicate=biological replicate 3', 'collected_by': 'Xichang University', 'geo_loc_name': 'China: Sichuan Province, HuiLi City', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2024-09-24', 'isolation_source': 'mycelial samples of Ceratocystis fimbriata strain F1 before chlamydospore formation'} |
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| SRR36356568 | - | - | - | 22167199 | China: Sichuan Province, HuiLi City | |
|
PRJNA1377537 SRX31385832 SRP653309 fungi RNA-Seq of Ceratocystis fimbriata: mycelium mRNA was enriched using Oligo(dT) magnetic beads. F1 {'strain': 'Ceratocystis fimbriata strain F1', 'isolate': 'F1', 'lat_lon': '26.65 N 102.24 E', 'replicate': 'replicate=biological replicate 1', 'collected_by': 'Xichang University', 'geo_loc_name': 'China: Sichuan Province, HuiLi City', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2024-09-24', 'isolation_source': 'mycelial samples of Ceratocystis fimbriata strain F1 after chlamydospore formation'} |
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| SRR36356580 | - | - | - | 28128741 | China: Sichuan Province, HuiLi City | |
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PRJNA1377537 SRX31385820 SRP653309 fungi RNA-Seq of Ceratocystis fimbriata: mycelium mRNA was enriched using Oligo(dT) magnetic beads. D1 {'strain': 'Ceratocystis fimbriata strain D1', 'isolate': 'D1', 'lat_lon': '26.65 N 102.24 E', 'replicate': 'replicate=biological replicate 2', 'collected_by': 'Xichang University', 'geo_loc_name': 'China: Sichuan Province, HuiLi City', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2024-09-24', 'isolation_source': 'mycelial samples of Ceratocystis fimbriata strain D1 before chlamydospore formation'} |
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Literature
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