Capsella bursa-pastoris
TaxID: 3719
Basic Information
Capsella bursa-pastoris
Almindelig hyrdetaske, Shepherd's Purse, shepherd's purse
Capsella bursa-pastoris, commonly known as shepherd's purse or lady's purse, is a small flowering plant in the mustard family. It has been described as a protocarnivore because its seeds contain mucilage, which traps nematodes. The plant is native to Eurasia but is naturalized and considered a common weed in many parts of the world, especially in colder climates. It has a number of culinary uses.
from Wikipedia
Taxonomic Information
Eukaryota
Streptophyta
Magnoliopsida
Brassicales
Brassicaceae
Capsella
bursa-pastoris
Unclassified
Species
nan
d__Eukaryota;p__Streptophyta;c__Magnoliopsida;o__Brassicales;f__Brassicaceae;g__Capsella;s__Capsella bursa-pastoris
nan
Weeds
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (3 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (117 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Afghanistan | Present | — |
| Albania | Present | — |
| Algeria | Present | — |
| Andorra | Present | — |
| Argentina | Present | — |
| Armenia | Present | — |
| Australia | Present | — |
| Austria | Present | — |
| Azerbaijan | Present | — |
| Burundi | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_001974645.2 | Chromosome | 362 | 951 | 14506 | - |
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ASM197464v2 |
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Transcriptomes (6 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR19633603 | leaf | 11-leaf stage | - | 49104538 | Jordan: Amman | |
|
PRJNA848625 SRX15683966 SRP379819 weed RNA-Seq of Capsella bursa-pastoris: leaf Total RNA was extracted with a cetyl-trimethyl-ammonium-bromide (CTAB) based method. Libraries were prepared using the TruSeq stranded mRNA library preparation kit with polyA selection. JO56 {'group': 'Cbp', 'family': '11', 'tissue': 'leaf', 'isolate': 'JO56', 'dev_stage': '11-leaf stage', 'replicate': '3', 'geo_loc_name': 'Jordan: Amman', 'ploidy_level': '4x', 'biosamplemodel': 'Plant', 'biomaterial_provider': 'Martin Lascoux, Uppsala Univeristy'} |
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| SRR19633594 | leaf | 11-leaf stage | - | 37383461 | Turkey: Istanbul | |
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PRJNA848625 SRX15683975 SRP379819 weed RNA-Seq of Capsella bursa-pastoris: leaf Total RNA was extracted with a cetyl-trimethyl-ammonium-bromide (CTAB) based method. Libraries were prepared using the TruSeq stranded mRNA library preparation kit with polyA selection. TR83 {'group': 'Cbp', 'family': '12', 'tissue': 'leaf', 'isolate': 'TR83', 'dev_stage': '11-leaf stage', 'replicate': '3', 'geo_loc_name': 'Turkey: Istanbul', 'ploidy_level': '4x', 'biosamplemodel': 'Plant', 'biomaterial_provider': 'Martin Lascoux, Uppsala Univeristy'} |
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| SRR19633583 | leaf | 11-leaf stage | - | 27095458 | Turkey: Istanbul | |
|
PRJNA848625 SRX15683986 SRP379819 weed RNA-Seq of Capsella bursa-pastoris: leaf Total RNA was extracted with a cetyl-trimethyl-ammonium-bromide (CTAB) based method. Libraries were prepared using the TruSeq stranded mRNA library preparation kit with polyA selection. TR83 {'group': 'Cbp', 'family': '12', 'tissue': 'leaf', 'isolate': 'TR83', 'dev_stage': '11-leaf stage', 'replicate': '3', 'geo_loc_name': 'Turkey: Istanbul', 'ploidy_level': '4x', 'biosamplemodel': 'Plant', 'biomaterial_provider': 'Martin Lascoux, Uppsala Univeristy'} |
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| SRR32808480 | above ground part | vegetative growth period | - | 21036024 | South Korea | |
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PRJNA1172376 SRX28092324 SRP538320 general RNA-seq: Capsella bursa-pastoris TruSeq RNA library prep kit (Illumina, CA, USA) Crop Wild Relatives {'tissue': 'above ground part', 'isolate': 'Crop Wild Relatives', 'dev_stage': 'vegetative growth period', 'treatment': 'Heat stress', 'geo_loc_name': 'South Korea', 'biosamplemodel': 'Plant', 'collection_date': '2024-11-14'} |
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| SRR32808479 | above ground part | vegetative growth period | - | 15747317 | South Korea | |
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PRJNA1172376 SRX28092325 SRP538320 general RNA-seq: Capsella bursa-pastoris TruSeq RNA library prep kit (Illumina, CA, USA) Crop Wild Relatives {'tissue': 'above ground part', 'isolate': 'Crop Wild Relatives', 'dev_stage': 'vegetative growth period', 'treatment': 'Heat stress', 'geo_loc_name': 'South Korea', 'biosamplemodel': 'Plant', 'collection_date': '2024-11-14'} |
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| SRR32808478 | above ground part | vegetative growth period | - | 13265546 | South Korea | |
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PRJNA1172376 SRX28092326 SRP538320 general RNA-seq: Capsella bursa-pastoris TruSeq RNA library prep kit (Illumina, CA, USA) Crop Wild Relatives {'tissue': 'above ground part', 'isolate': 'Crop Wild Relatives', 'dev_stage': 'vegetative growth period', 'treatment': 'Heat stress', 'geo_loc_name': 'South Korea', 'biosamplemodel': 'Plant', 'collection_date': '2024-11-14'} |
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DNA Barcodes (57 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| YNPBP1122-24 | - | trnL-F | 355 | United States | 1982-06-01 | - | |
| WAT267-12 | - | rbcLa | 553 | Canada | 2012-05-17 | 43.5485, -80.2503 | |
| VPSBC1483-14 | - | rbcLa | 552 | Canada | 2011-07-14 | 49.564, -120.41 | |
| VPSBC1340-14 | - | rbcLa | 538 | Canada | 2011-08-15 | 49.188, -119.088 | |
| VPL110-13 | - | rbcL | 553 | Luxembourg | 2012-06-11 | 49.766, 5.889 | |
| VPL096-13 | - | rbcL | 553 | Luxembourg | 2012-03-29 | 49.609, 6.1370000000000005 | |
| VEMSH177-13 | - | rbcLa | 571 | Canada | 2012-06-07 | 45.535, -73.149 | |
| SDH684-14 | - | rbcLa | 552 | United States | 1941-01-21 | 32.849, -116.921 | |
| POWNB230-10 | - | rbcL | 524 | United Kingdom | 2010-06-22 | 51.889, -3.9719 | |
| POWNB062-10 | - | rbcL | 542 | United Kingdom | 2010-08-30 | 51.5, -3.128 |
Literature
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Failed to fetch literature