Paracidovorax avenae
TaxID: 80867
Basic Information
Paracidovorax avenae
Red Stripe Disease
Taxonomic Information
Bacteria
Pseudomonadota
Betaproteobacteria
Burkholderiales
Comamonadaceae
Paracidovorax
avenae
Unclassified
Species
k__Bacteria;p__Pseudomonadota;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Paracidovorax;s__Paracidovorax avenae
Prokaryotes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (8 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Camellia sinensis | Host |
| Canna sp. | Host |
| Oryza sativa | Host |
| Panicum miliaceum | Host |
| Poaceae | Host |
| Saccharum officinarum | Host |
| Strelitzia nicolai | Host |
| Zea mays | Host |
Quarantine Status (9 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Burkina Faso | Present | — |
| Egypt | A1 list | 2018 |
| Guinea | Quarantine pests | — |
| Morocco | Quarantine pest | 2018 |
| Mexico | Quarantine pests | — |
| Myanmar | Quarantine pests | — |
| New Caledonia | Quarantine pests | — |
| Nicaragua | Absent | — |
| French Polynesia | Quarantine pests | — |
Distribution (49 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Argentina | Present | — |
| Australia | Present | — |
| Brazil | Present | — |
| Barbados | Present | — |
| Cambodia | Present | — |
| China | Present | |
| Democratic Republic of the Congo | Present | — |
| Colombia | Present | — |
| Costa Rica | Present | — |
| Cuba | Present | — |
Genomes (2 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_003029685.1 | Chromosome | 5 | 5751 | 5751 | - |
|
|
|
ASM302968v1 |
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| GCF_001282395.1 | Contig | 5 | 191 | 191 | - |
|
|
|
ASM128239v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR960975 | - | - | - | 14299908 | - | |
|
PRJNA217854 SRX342632 SRP029426 GSM1220693: In vivo Rep 2; Acidovorax avenae subsp. avenae RS-1; RNA-Seq RS-1 {'strain': 'RS-1', 'source_name': 'Aaa strain RS-1_in vitro', 'sub_species': 'avenae', 'culture type': 'In vivo', 'growth phase': 'exponential phase'} |
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| SRR960976 | - | - | - | 14039661 | - | |
|
PRJNA217854 SRX342633 SRP029426 GSM1220694: Coculture Rep 1; Acidovorax avenae subsp. avenae RS-1; RNA-Seq RS-1 {'strain': 'RS-1', 'source_name': 'Aaa strain RS-1_coculture', 'sub_species': 'avenae', 'culture type': 'Coculture with B. seminalis strain R456', 'growth phase': 'exponential phase'} |
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| SRR960977 | - | - | - | 14316689 | - | |
|
PRJNA217854 SRX342634 SRP029426 GSM1220695: Coculture Rep 2; Acidovorax avenae subsp. avenae RS-1; RNA-Seq RS-1 {'strain': 'RS-1', 'source_name': 'Aaa strain RS-1_coculture', 'sub_species': 'avenae', 'culture type': 'Coculture with B. seminalis strain R456', 'growth phase': 'exponential phase'} |
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Literature
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