Cassava brown streak virus
TaxID: 137758
Basic Information
Cassava brown streak virus
Cassava Brown Streak Virus
Cassava brown streak virus is a species of positive-strand RNA viruses in the genus Ipomovirus and family Potyviridae which infects plants. Member viruses are unique in their induction of pinwheel, or scroll-shaped inclusion bodies in the cytoplasm of infected cells. Cylindrical inclusion bodies include aggregations of virus-encoded helicase proteins. These inclusion bodies are thought to be sites of viral replication and assembly, making then an important factor in the viral lifecycle. Viruses from both the species Cassava brown streak virus and Ugandan cassava brown streak virus (UCBSV), lead to the development of Cassava Brown Streak Disease (CBSD) within cassava plants.
from Wikipedia
Taxonomic Information
unclassified
Pisuviricota
Stelpaviricetes
Patatavirales
Potyviridae
Ipomovirus
Ipomovirus brunusmanihotis
nan
No Rank
nan
k__unclassified;p__Pisuviricota;c__Stelpaviricetes;o__Patatavirales;f__Potyviridae;g__Ipomovirus;s__Ipomovirus brunusmanihotis
nan
Viruses/Viroids
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (13 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Burkina Faso | Absent | — |
| Ghana | Quarantine pests | — |
| Guinea | Quarantine pests | — |
| Haiti | Quarantine pests | — |
| India | Quarantine pests | — |
| Jamaica | Quarantine pests | — |
| Sri Lanka | Quarantine pests | — |
| Mauritius | Quarantine pests | — |
| Malaysia | Quarantine pests | — |
| New Caledonia | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_000884835.1 | Complete Genome | - | 8 | 8 | - |
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ViralProj38085 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR27167821 | - | - | - | 1 | Tanzania | |
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PRJNA1050858 SRX22848668 SRP477222 virus small RNA seq of Albert_ngC+U Total RNA was extracted from leaves using the cetyl-trimethyl-ammonium bromide Not provided {'host': 'Cassava', 'country': 'Tanzania', 'isolate': 'Not provided', 'location': 'Naliendele-Mtwara', 'library_id': 'JAP19', 'collected by': 'Veneranda Ngazi & Maliha Saggaf', 'biosamplemodel': 'Viral', 'isolate source': 'Not provided', 'collection date': '2020-03-10'} |
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| SRR27167819 | - | - | - | 1 | Tanzania | |
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PRJNA1050858 SRX22848670 SRP477222 virus small RNA seq of Albert_ngU Total RNA was extracted from leaves using the cetyl-trimethyl-ammonium bromide Not provided {'host': 'Cassava', 'country': 'Tanzania', 'isolate': 'Not provided', 'location': 'Naliendele-Mtwara', 'library_id': 'JAP18', 'collected by': 'Veneranda Ngazi & Maliha Saggaf', 'biosamplemodel': 'Viral', 'isolate source': 'Not provided', 'collection date': '2020-03-10'} |
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| SRR27167818 | - | - | - | 1 | Tanzania | |
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PRJNA1050858 SRX22848671 SRP477222 virus small RNA seq of Albert_ngC Total RNA was extracted from leaves using the cetyl-trimethyl-ammonium bromide Not provided {'host': 'Cassava', 'country': 'Tanzania', 'isolate': 'Not provided', 'location': 'Naliendele-Mtwara', 'library_id': 'JAP17', 'collected by': 'Veneranda Ngazi & Maliha Saggaf', 'biosamplemodel': 'Viral', 'isolate source': 'Not provided', 'collection date': '2020-03-10'} |
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Literature
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