Colletotrichum lindemuthianum
TaxID: 290576
Basic Information
Colletotrichum lindemuthianum
Bean Anthracnose, bönfläck
Colletotrichum lindemuthianum is a fungus which causes anthracnose, or black spot disease, of the common bean plant (Phaseolus vulgaris). It is considered a hemibiotrophic pathogen because it spends part of its infection cycle as a biotroph, living off of the host but not harming it, and the other part as a necrotroph, killing and obtaining nutrients from the host tissues.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Glomerellales
Glomerellaceae
Colletotrichum
lindemuthianum
Undefined
Species
nan
d__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Glomerellales;f__Glomerellaceae;g__Colletotrichum;s__Colletotrichum lindemuthianum
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (7 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Angola | Quarantine pests | — |
| Burundi | Quarantine pests | — |
| Burkina Faso | Present | — |
| Egypt | Regulated non-quarantine pest | 2018 |
| Paraguay | Quarantine pests | — |
| Sao Tome and Principe | Quarantine pests | — |
| Uruguay | Absent | — |
Distribution (23 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| Austria | Present | — |
| Brazil | Present | — |
| Cambodia | Present | — |
| Canada | Present | — |
| Colombia | Present | — |
| Germany | Present | — |
| Denmark | Present | — |
| Estonia | Present | — |
| United Kingdom | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_001693015.2 | Scaffold | 97 | 100 | 111 | - |
|
|
|
ASM169301v2 |
|||||||
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR29223097 | - | - | - | 31512708 | Brazil: UFV, Minas gerais | |
|
PRJNA325493 SRX24742553 SRP510650 fungi RNA-seq Colletotrichum lindemuthianum in GPYECH growth medium NucleoSpin RNA Plant and Fungi, Illumina platform Vegetative-R1 {'strain': 'race 89 A2 2-3', 'isolate': 'Vegetative-R1', 'lat_lon': '20.7539 S 42.8819 W', 'collected_by': 'UFV', 'geo_loc_name': 'Brazil: UFV, Minas gerais', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2020', 'isolation_source': 'Phaseolus vulgaris'} |
||||||
| SRR29223096 | - | - | - | 28639391 | Brazil: UFV, Minas gerais | |
|
PRJNA325493 SRX24742554 SRP510650 fungi RNA-seq Colletotrichum lindemuthianum in GPYECH growth medium NucleoSpin RNA Plant and Fungi, Illumina platform Vegetative-R2 {'strain': 'race 89 A2 2-3', 'isolate': 'Vegetative-R2', 'lat_lon': '20.7539 S 42.8819 W', 'collected_by': 'UFV', 'geo_loc_name': 'Brazil: UFV, Minas gerais', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2020', 'isolation_source': 'Phaseolus vulgaris'} |
||||||
| SRR29223095 | - | - | - | 30339671 | Brazil: UFV, Minas gerais | |
|
PRJNA325493 SRX24742555 SRP510650 fungi RNA-seq Colletotrichum lindemuthianum in GPYECH growth medium NucleoSpin RNA Plant and Fungi, Illumina platform Vegetative-R3 {'strain': 'race 89 A2 2-3', 'isolate': 'Vegetative-R3', 'lat_lon': '20.7539 S 42.8819 W', 'collected_by': 'UFV', 'geo_loc_name': 'Brazil: UFV, Minas gerais', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2020', 'isolation_source': 'Phaseolus vulgaris'} |
||||||
Literature
Fetching literature from NCBI PubMed...
Failed to fetch literature