Meloidogyne graminicola
TaxID: 189291
Basic Information
Meloidogyne graminicola
Oosters rijstwortelknobbelaaltje, Rice Root‐knot Nematode
nan
from Wikipedia
Taxonomic Information
Eukaryota
Nematoda
Chromadorea
Rhabditida
Meloidogynidae
Meloidogyne
graminicola
nan
Species
nan
k__Eukaryota;p__Nematoda;c__Chromadorea;o__Rhabditida;f__Meloidogynidae;g__Meloidogyne;s__Meloidogyne graminicola
nan
Nematodes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (109 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Abelmoschus esculentus | Host |
| Ageratum conyzoides | Host |
| Agrostis stolonifera | Host |
| Alisma plantago-aquatica | Host |
| Allium cepa | Host |
| Allium fistulosum | Host |
| Allium tuberosum | Host |
| Alopecurus carolinianus | Host |
| Alopecurus sp. | Host |
| Alternanthera sessilis | Host |
Quarantine Status (35 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Austria | Emergency measures | 2022 |
| Belgium | Emergency measures | 2022 |
| Burkina Faso | Absent | — |
| Bulgaria | Emergency measures | 2022 |
| Cyprus | Emergency measures | 2022 |
| Czechia | Emergency measures | 2022 |
| Germany | Emergency measures | 2022 |
| Denmark | Emergency measures | 2022 |
| EPPO A2 | Present | — |
| Spain | Emergency measures | 2022 |
Distribution (23 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Bangladesh | Present | — |
| Brazil | Present | |
| Cambodia | Present | — |
| China | Present | |
| Colombia | Present | — |
| Ecuador | Present | — |
| Indonesia | Present | — |
| India | Present | — |
| Italy | Present | — |
| Lao People's Democratic Republic | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_002778205.2 | Scaffold | 36 | 105 | 105 | - |
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Mgram_IARI_PacBio |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR17162196 | egg | - | - | 16372302 | China: Wuhan, Hubei Province | |
|
PRJNA786696 SRX13346104 SRP349690 general MgF1-1 RNA sequencing RNA extracting was using the TransZol Up Plus RNA Kit (TransGen Biotech, Beijinng, China) and RNA Nano 6000 Assay Kit of the Bioanalyzer 2100 system (Agilent Technologies, CA, USA) was using to assess the RNA integrity and concentration. The RNA library preparation was used 2 g RNA per sample, and generate the sequencing libraries following the manufacturers recommendations. After library examination and cluster generation, the library was sequenced on an Illumina platform. Wuhan {'tissue': 'egg', 'isolate': 'Wuhan', 'geo_loc_name': 'China: Wuhan, Hubei Province', 'biosamplemodel': 'Invertebrate', 'collection_date': '2018-05-08', 'isolation_source': 'rice'} |
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| SRR17162185 | egg | - | - | 22440026 | China: Wuhan, Hubei Province | |
|
PRJNA786696 SRX13346115 SRP349690 general MgF1-1 RNA sequencing RNA extracting was using the TransZol Up Plus RNA Kit (TransGen Biotech, Beijinng, China) and RNA Nano 6000 Assay Kit of the Bioanalyzer 2100 system (Agilent Technologies, CA, USA) was using to assess the RNA integrity and concentration. The RNA library preparation was used 2 g RNA per sample, and generate the sequencing libraries following the manufacturers recommendations. After library examination and cluster generation, the library was sequenced on an Illumina platform. Wuhan {'tissue': 'egg', 'isolate': 'Wuhan', 'geo_loc_name': 'China: Wuhan, Hubei Province', 'biosamplemodel': 'Invertebrate', 'collection_date': '2018-05-08', 'isolation_source': 'rice'} |
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| SRR17162177 | egg | - | - | 28517710 | China: Wuhan, Hubei Province | |
|
PRJNA786696 SRX13346126 SRP349690 general MgF1-1 RNA sequencing RNA extracting was using the TransZol Up Plus RNA Kit (TransGen Biotech, Beijinng, China) and RNA Nano 6000 Assay Kit of the Bioanalyzer 2100 system (Agilent Technologies, CA, USA) was using to assess the RNA integrity and concentration. The RNA library preparation was used 2 g RNA per sample, and generate the sequencing libraries following the manufacturers recommendations. After library examination and cluster generation, the library was sequenced on an Illumina platform. Wuhan {'tissue': 'egg', 'isolate': 'Wuhan', 'geo_loc_name': 'China: Wuhan, Hubei Province', 'biosamplemodel': 'Invertebrate', 'collection_date': '2018-05-08', 'isolation_source': 'rice'} |
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DNA Barcodes (133 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| GBMTG3837-16 | BOLD:ADC2687 | ND6 | 387 | - | - | - | |
| GBMTG3837-16 | BOLD:ADC2687 | ND5-0 | 1452 | - | - | - | |
| GBMTG3837-16 | BOLD:ADC2687 | ND4L | 237 | - | - | - | |
| GBMTG3837-16 | BOLD:ADC2687 | ND4 | 1167 | - | - | - | |
| GBMTG3837-16 | BOLD:ADC2687 | ND3 | 309 | - | - | - | |
| GBMTG3837-16 | BOLD:ADC2687 | ND2 | 804 | - | - | - | |
| GBMTG3837-16 | BOLD:ADC2687 | ND1 | 847 | - | - | - | |
| GBMTG3837-16 | BOLD:ADC2687 | CYTB | 1032 | - | - | - | |
| GBMTG3837-16 | BOLD:ADC2687 | COXIII | 768 | - | - | - | |
| GBMTG3837-16 | BOLD:ADC2687 | COII | 645 | - | - | - |
Literature
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