Mycena citricolor
TaxID: 2018698
Basic Information
Mycena citricolor
Eye Spot of Coffee
Mycena citricolor is a species of mushroom-forming fungus in the family Mycenaceae. It is a plant pathogen producing leaf spots on coffee plants. This fungus causes the disease commonly known as American Leaf Spot. Mycena citricolor affects coffee plants, primarily in Latin America, but can grow on other plants as well. This fungus can grow on all parts of the coffee plant including the leaves, stems and fruits. When grown on the leaves, Mycena citricolor results in leaves with holes that often fall from the plant.
from Wikipedia
Taxonomic Information
Eukaryota
Basidiomycota
Agaricomycetes
Agaricales
Mycenaceae
Mycena
citricolor
nan
Species
nan
k__Eukaryota;p__Basidiomycota;c__Agaricomycetes;o__Agaricales;f__Mycenaceae;g__Mycena;s__Mycena citricolor
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (2 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Coffea | Host |
| Coffea arabica | Host |
Quarantine Status (13 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Argentina | Absent | 2019 |
| Bangladesh | Quarantine pests | — |
| China | Quarantine pests | 2021 |
| Guinea | Quarantine pests | — |
| Indonesia | Absent | — |
| India | Quarantine pests | — |
| Sri Lanka | Quarantine pests | — |
| Malaysia | Quarantine pests | — |
| Nepal | Quarantine pests | — |
| Senegal | Quarantine pests | — |
Distribution (25 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Bolivia (Plurinational State of) | Present | — |
| Brazil | Present | — |
| Colombia | Present | — |
| Costa Rica | Present | — |
| Cuba | Present | — |
| Dominica | Present | — |
| Dominican Republic | Present | — |
| Ecuador | Present | — |
| Guadeloupe | Present | — |
| Guatemala | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_003987915.1 | Contig | 75 | 16 | 16 | - |
|
|
|
ASM398791v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| ERR12323082 | - | - | - | 12190098 | - | |
|
PRJEB69683 ERX11699923 ERP154617 fungi Illumina HiSeq 2500 paired end sequencing {'habitat': 'agricultural experimental station', 'lifestage': 'vegetative structure', 'external id': 'SAMEA114757745', 'sample name': 'Mycena citricolor 010', 'collected_by': 'FNC-Cenicaf��s Plant Pathology lab', 'insdc status': 'public', 'project name': 'Reference Genome Mycena citricolor', 'submitter id': 'Mycena citricolor 010', 'organism part': 'micelia', 'collection date': '2019', 'ena-last-update': '2023-11-28T16:32:32Z', 'scientific_name': 'Mycena citricolor', 'ena-first-public': '2023-11-28T16:32:32Z', 'insdc center name': 'TGAC', 'insdc last update': '2023-11-28T16:32:32Z', 'insdc first public': '2023-11-28T16:32:32Z', 'collecting institution': 'FNC-Cenicaf��s Plant Pathology lab', 'geographic location (latitude)': '2.401866', 'geographic location (longitude)': '-76.738102', 'geographic location (country and/or sea)': 'Colombia', 'geographic location (region and locality)': 'El Tambo, Cauca, Colombia'} |
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| ERR12323084 | - | - | - | 22540411 | - | |
|
PRJEB69683 ERX11699925 ERP154617 fungi Illumina HiSeq 2500 paired end sequencing {'habitat': 'agricultural experimental station', 'lifestage': 'vegetative structure', 'external id': 'SAMEA114757745', 'sample name': 'Mycena citricolor 010', 'collected_by': 'FNC-Cenicaf��s Plant Pathology lab', 'insdc status': 'public', 'project name': 'Reference Genome Mycena citricolor', 'submitter id': 'Mycena citricolor 010', 'organism part': 'micelia', 'collection date': '2019', 'ena-last-update': '2023-11-28T16:32:32Z', 'scientific_name': 'Mycena citricolor', 'ena-first-public': '2023-11-28T16:32:32Z', 'insdc center name': 'TGAC', 'insdc last update': '2023-11-28T16:32:32Z', 'insdc first public': '2023-11-28T16:32:32Z', 'collecting institution': 'FNC-Cenicaf��s Plant Pathology lab', 'geographic location (latitude)': '2.401866', 'geographic location (longitude)': '-76.738102', 'geographic location (country and/or sea)': 'Colombia', 'geographic location (region and locality)': 'El Tambo, Cauca, Colombia'} |
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| ERR12323083 | - | - | - | 10683227 | - | |
|
PRJEB69683 ERX11699924 ERP154617 fungi Illumina HiSeq 2500 paired end sequencing {'habitat': 'agricultural experimental station', 'lifestage': 'vegetative structure', 'external id': 'SAMEA114757745', 'sample name': 'Mycena citricolor 010', 'collected_by': 'FNC-Cenicaf��s Plant Pathology lab', 'insdc status': 'public', 'project name': 'Reference Genome Mycena citricolor', 'submitter id': 'Mycena citricolor 010', 'organism part': 'micelia', 'collection date': '2019', 'ena-last-update': '2023-11-28T16:32:32Z', 'scientific_name': 'Mycena citricolor', 'ena-first-public': '2023-11-28T16:32:32Z', 'insdc center name': 'TGAC', 'insdc last update': '2023-11-28T16:32:32Z', 'insdc first public': '2023-11-28T16:32:32Z', 'collecting institution': 'FNC-Cenicaf��s Plant Pathology lab', 'geographic location (latitude)': '2.401866', 'geographic location (longitude)': '-76.738102', 'geographic location (country and/or sea)': 'Colombia', 'geographic location (region and locality)': 'El Tambo, Cauca, Colombia'} |
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Literature
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