Pseudomonas savastanoi pv. phaseolicola
TaxID: 319
Basic Information
Pseudomonas savastanoi pv. phaseolicola
Grease Spot of Bean
Pseudomonas savastanoi is a gram-negative plant pathogenic bacterium that infects a variety of plants. It was once considered a pathovar of Pseudomonas syringae, but following DNA-relatedness studies, it was instated as a new species. It is named after Savastano, a worker who proved between 1887 and 1898 that olive knot are caused by bacteria. The pathovar of greatest economical significance is Pseudomonas savastanoi pv. savastanoi, which causes the disease olive knot. Symptoms include formation of galls on infected trees; tumour formation is induced by indoleacetic acid biosynthesis by the bacteria, in a similar manner to the well-studied crown gall pathogen, Agrobacterium tumefaciens.
from Wikipedia
Taxonomic Information
Bacteria
Pseudomonadota
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
savastanoi
pv. phaseolicola
Under_Species
nan
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas savastanoi
nan
Prokaryotes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (1 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Phaseolus vulgaris | Host |
Quarantine Status (15 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Burundi | Quarantine pests | — |
| Burkina Faso | Present | — |
| Bahrain | A1 list | 2003 |
| China | Quarantine pests | 2021 |
| Cuba | Absent | — |
| Guatemala | Absent | — |
| Iran | Absent | 2018 |
| Israel | Quarantine pest | 2009 |
| Jordan | A2 list | 2013 |
| Sri Lanka | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (2 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_041378945.2 | Complete Genome | 6 | 5912 | 5912 | - |
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Pseudomonas savastanoi pathovar phaseolicola HB10Y |
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| GCF_001294025.1 | Scaffold | 6 | 35 | 139 | - |
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Pph1302A |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR21171447 | - | - | - | 3069185 | - | |
|
PRJNA623230 SRX17182555 SRP255316 GSM6504497: WT-6 [RNA-seq]; Pseudomonas savastanoi pv. phaseolicola 1448A; RNA-Seq wild type {'strain': 'wild type', 'pathovar': 'phaseolicola 1448A', 'condition': 'liquid culture in minimal medium', 'source_name': 'liquid culture in minimal medium'} |
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| SRR21171448 | - | - | - | 3021536 | - | |
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PRJNA623230 SRX17182556 SRP255316 GSM6504498: WT-7 [RNA-seq]; Pseudomonas savastanoi pv. phaseolicola 1448A; RNA-Seq wild type {'strain': 'wild type', 'pathovar': 'phaseolicola 1448A', 'condition': 'liquid culture in minimal medium', 'source_name': 'liquid culture in minimal medium'} |
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| SRR21171449 | - | - | - | 3016705 | - | |
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PRJNA623230 SRX17182557 SRP255316 GSM6504499: WT-8 [RNA-seq]; Pseudomonas savastanoi pv. phaseolicola 1448A; RNA-Seq wild type {'strain': 'wild type', 'pathovar': 'phaseolicola 1448A', 'condition': 'liquid culture in minimal medium', 'source_name': 'liquid culture in minimal medium'} |
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Literature
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