Heterodera schachtii
TaxID: 97005
Basic Information
Heterodera schachtii
Beet Nematode, Sugar beet nematode
Heterodera schachtii, the beet cyst eelworm or sugarbeet nematode, is a plant pathogenic nematode. It infects more than 200 different plants including economically important crops such as sugar beets, cabbage, broccoli, and radish. H. schachtii is found worldwide. Affected plants are marked by stunted growth, wilting, yellowing, decreased yields, and death. While there are many methods of control, crop rotation with non-susceptible plants is preferred.
from Wikipedia
Taxonomic Information
Eukaryota
Nematoda
Chromadorea
Rhabditida
Heteroderidae
Heterodera
schachtii
-
Species
nan
d__Eukaryota;p__Nematoda;c__Chromadorea;o__Rhabditida;f__Heteroderidae;g__Heterodera;s__Heterodera schachtii
nan
Nematodes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (2 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Beta vulgaris | Host |
| Brassica | Host |
Quarantine Status (24 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Argentina | Absent | 2019 |
| Burkina Faso | Absent | — |
| Brazil | A1 list | 2018 |
| China | Quarantine pests | 2021 |
| Costa Rica | Absent | — |
| Cuba | Absent | — |
| Dominican Republic | Quarantine pests | — |
| Guinea | Quarantine pests | — |
| Guatemala | Absent | — |
| India | Quarantine pests | — |
Distribution (58 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Albania | Present | — |
| Algeria | Present | — |
| Australia | Present | |
| Austria | Present | — |
| Azerbaijan | Present | — |
| Belgium | Present | — |
| Bulgaria | Present | — |
| Canada | Present | |
| Switzerland | Present | — |
| Chile | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_019095935.1 | Scaffold | 179 | 301 | 1273 | - |
|
|
|
Hsch_Bonn_V1.0 |
|||||||
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| ERR12410747 | - | - | - | 11544026 | - | |
|
PRJEB71499 ERX11787105 ERP156299 general Illumina NovaSeq 6000 paired end sequencing {'cell_type': 'Mixed Dorsal and SubVentral Gland Cells', 'sample name': 'parJ2_3a', 'insdc status': 'public', 'submitter id': 'parJ2_3a', 'collection date': '2019-12', 'scientific_name': 'Heterodera schachtii', 'ena first public': '2024-01-25', 'insdc center name': 'UNIVERSITY OF CAMBRIDGE', 'geographic location (country and/or sea)': 'USA'} |
||||||
| ERR12410740 | - | - | - | 82209437 | - | |
|
PRJEB71499 ERX11787098 ERP156299 general Illumina NovaSeq 6000 paired end sequencing {'cell_type': 'Mixed Dorsal and SubVentral Gland Cells', 'sample name': 'preparJ2_1', 'insdc status': 'public', 'submitter id': 'preparJ2_1', 'collection date': '2022-11', 'scientific_name': 'Heterodera schachtii', 'ena first public': '2024-01-25', 'insdc center name': 'UNIVERSITY OF CAMBRIDGE', 'geographic location (country and/or sea)': 'United Kingdom'} |
||||||
| ERR12410744 | - | - | - | 14038970 | - | |
|
PRJEB71499 ERX11787102 ERP156299 general Illumina NovaSeq 6000 paired end sequencing {'cell_type': 'Mixed Dorsal and SubVentral Gland Cells', 'sample name': 'preparJ2_5', 'insdc status': 'public', 'submitter id': 'preparJ2_5', 'collection date': '2022-11', 'scientific_name': 'Heterodera schachtii', 'ena first public': '2024-01-25', 'insdc center name': 'UNIVERSITY OF CAMBRIDGE', 'geographic location (country and/or sea)': 'United Kingdom'} |
||||||
DNA Barcodes (125 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| GBNM5602-19 | - | COI-3P | 436 | Mexico | - | 23.874361, -101.554 | |
| GBNM5601-19 | - | COI-3P | 436 | Mexico | - | 23.874361, -101.554 | |
| GBNM5580-19 | BOLD:AED6360 | COI-5P | 862 | United States | - | 38.82081, -96.33162 | |
| GBNM5491-19 | BOLD:AED6360 | COI-5P | 862 | United States | - | 38.82081, -96.33162 | |
| GBNM5490-19 | BOLD:AED6360 | COI-5P | 862 | United States | - | 38.82081, -96.33162 | |
| GBNM5489-19 | BOLD:AED6360 | COI-5P | 862 | United States | - | 38.82081, -96.33162 | |
| GBNM5488-19 | BOLD:AED6360 | COI-5P | 862 | United States | - | 38.82081, -96.33162 | |
| GBNM5487-19 | BOLD:AED6360 | COI-5P | 862 | United States | - | 38.82081, -96.33162 | |
| GBNM5486-19 | BOLD:AED6360 | COI-5P | 862 | United States | - | 38.82081, -96.33162 | |
| GBNM5485-19 | BOLD:AED6360 | COI-5P | 862 | United States | - | 38.82081, -96.33162 |
Literature
Fetching literature from NCBI PubMed...
Failed to fetch literature