Potato spindle tuber viroid

TaxID: 12892

Basic Information

Potato spindle tuber viroid

Potato Spindle Tuber Viroid

The potato spindle tuber viroid (PSTVd, Pospiviroid fusituberis) was the first viroid to be identified. PSTVd is a small, single stranded circular RNA molecule closely related to the chrysanthemum stunt viroid. Present within the viroidal RNA is the Pospiviroid RY motif stem loop common to its genus. The natural hosts are potatoes (Solanum tuberosum) and tomatoes (Solanum lycopersicum). All potatoes and tomatoes are susceptible to PSTVd and there is no form of natural resistance. Natural infections have also been seen in avocados and infections in other solanaceous crops have been induced in the laboratory. Until 2017 PSTVd was thought to be unable to infect Solanum sisymbriifolium. Then in May seeds exported by a Dutch company were noticed to be infected. These seeds were shipped from the company, but had been originally bred to their specifications in two Asian countries. PSTVd also causes tomato bunchy top and is seed transmitted in tomato. It contains single stranded RNA without protein coat.

from Wikipedia

Taxonomic Information

unclassified

unclassified

unclassified

unclassified

Pospiviroidae

Pospiviroid

Pospiviroid fusituberis

nan

Photos (0 photos)

No photos available.

Morphological Features

No morphological description available.

Host Plants (54 host plants)

Data sources: EPPO Global Database and relevant literature.

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Quarantine Status (45 records)

Data sources: IPPC website and national quarantine websites; verified by human review.

Country Status Year Added
Albania Quarantine pests —
Argentina Absent —
Armenia Absent —
Burkina Faso Present —
Bulgaria Quarantine pests —
Belarus Present —
Canada Quarantine pests —
China Quarantine pests —
Cuba Absent —
Cyprus Quarantine pests —
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Distribution (0 countries)

Data Sources: EPPO Global Database and GBIF.

0
Present
0
Absent
0
Unknown/Other

No distribution records available.

Genomes (1 records)

Data source: NCBI.

Assembly Accession Assembly Level Genome Size(Mb) Contig N50(Kb) Scaffold N50(Kb) BUSCO% Downloads Actions
GCF_000856265.1 Complete Genome - - - -

Transcriptomes (2 records)

Data source: NCBI.

Run ID Tissue Developmental Stage Sex Read Count Location Actions
SRR11428498,SRR11428499,SRR11428500,SRR11428501 - - - 297430 N/A
SRR11428502,SRR11428503,SRR11428504,SRR11428505 - - - 504032 N/A

DNA Barcodes (0 records)

View all

Data source: BOLD.

No DNA barcode records available.

Literature