Pinus radiata
TaxID: 3347
Basic Information
Pinus radiata
Cedros Island Pine, Monterey pine, Radiata Pine
Pinus radiata (syn. Pinus insignis), the Monterey pine, insignis pine or radiata pine, is a species of pine native to the Central Coast of California, and the Guadalupe and Cedros islands of Mexico. It is an evergreen conifer in the family Pinaceae. Pinus radiata is a versatile, fast-growing, medium-density softwood, suitable for a wide range of uses and valued for rapid growth (up to two meters (6.5 feet) in one year), as well as desirable lumber and pulp qualities. Its silviculture reflects a century of research, observation and practice. It is often considered a model for growers of other plantation species. Although P. radiata is extensively cultivated as a plantation timber in many temperate parts of the world, it faces serious threats in its natural range, due to the introduction of a fungal parasite, the pine pitch canker (Fusarium circinatum). The pine shoot moth Rhyacionia buoliana is another serious problem. In cultivation in New Zealand, Pinus radiata has grown as much as 61 m (200 ft) in 41 years, an average of 1.5 m (4 ft 11 in) per year.
from Wikipedia
Taxonomic Information
Eukaryota
Streptophyta
Pinopsida
Pinales
Pinaceae
Pinus
radiata
Unclassified
Species
nan
d__Eukaryota;p__Streptophyta;c__Pinopsida;o__Pinales;f__Pinaceae;g__Pinus;s__Pinus radiata
nan
Weeds
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| French Polynesia | Absent | — |
Distribution (28 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Argentina | Present | — |
| Australia | Present | — |
| Bolivia (Plurinational State of) | Present | — |
| Brazil | Present | — |
| Chile | Present | — |
| China | Present | — |
| Cameroon | Present | — |
| Democratic Republic of the Congo | Present | — |
| Colombia | Present | — |
| Ecuador | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_050662955.1 | Chromosome | 22408 | 175 | 221 | - |
|
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ASM5066295v1 |
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Transcriptomes (4 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| ERR2040836 | - | - | - | 17515077 | - | |
|
PRJEB21674 ERX2099893 ERP023948 weed Illumina HiSeq 2000 paired end sequencing {'sequencer': 'HiSeq', 'common name': 'Monterey pine', 'external id': 'SAMEA104170880', 'sample name': 'DZQM', 'tissue type': 'leaf', 'insdc status': 'public', 'submitter id': 'DZQM', 'source_mat_id': 'P. Thomas 20090072 (E)', 'ena last update': '2017-07-23', 'ena first public': '2017-07-23', 'insdc center name': 'Department of Biological Sciences', 'insdc last update': '2017-07-23T05:36:40Z', 'insdc center alias': 'Department of Biological Sciences', 'insdc first public': '2017-07-23T17:01:29Z'} |
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| SRR28604509 | Seed_late | Late | - | 511386 | New Zealand: Rotorua | |
|
PRJNA1098359 SRX24202990 SRP500631 general Reference transcriptome for Pinus radiata genome : Germinated seed late tissue Transcriptome sequencing not provided {'tissue': 'Seed_late', 'isolate': 'not provided', 'dev_stage': 'Late', 'geo_loc_name': 'New Zealand: Rotorua', 'biosamplemodel': 'Plant', 'collection_date': '2020-02', 'biomaterial_provider': 'Scion'} |
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| SRR28604508 | Needle_infected_field | Mature | - | 437881 | New Zealand: Rotorua | |
|
PRJNA1098359 SRX24202991 SRP500631 general Reference transcriptome for Pinus radiata genome : Phytophthora pluvialis infected needle tissue Field sample Transcriptome sequencing not provided {'tissue': 'Needle_infected_field', 'isolate': 'not provided', 'dev_stage': 'Mature', 'geo_loc_name': 'New Zealand: Rotorua', 'biosamplemodel': 'Plant', 'collection_date': '2012-11', 'biomaterial_provider': 'Scion'} |
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| SRR28604507 | Needle_infected_lab | Mature | - | 422325 | New Zealand: Rotorua | |
|
PRJNA1098359 SRX24202992 SRP500631 general Reference transcriptome for Pinus radiata genome : Phytophthora pluvialis infected needle tissue Lab sample Transcriptome sequencing not provided {'tissue': 'Needle_infected_lab', 'isolate': 'not provided', 'dev_stage': 'Mature', 'geo_loc_name': 'New Zealand: Rotorua', 'biosamplemodel': 'Plant', 'collection_date': '2012-11', 'biomaterial_provider': 'Scion'} |
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DNA Barcodes (21 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| PNCA249-12 | - | trnH-psbA | 618 | United States | 1976-01-01 | 38.739, -120.742 | |
| PNCA249-12 | - | trnD-trnY-trnE | 760 | United States | 1976-01-01 | 38.739, -120.742 | |
| PNCA249-12 | - | rbcL | 607 | United States | 1976-01-01 | 38.739, -120.742 | |
| PNCA249-12 | - | matK | 812 | United States | 1976-01-01 | 38.739, -120.742 | |
| PNCA025-09 | - | trnH-psbA | 627 | United States | 2006-07-30 | - | |
| PNCA025-09 | - | trnD-trnY-trnE | 760 | United States | 2006-07-30 | - | |
| PNCA025-09 | - | rbcL | 607 | United States | 2006-07-30 | - | |
| PNCA025-09 | - | matK | 837 | United States | 2006-07-30 | - | |
| GBVQ2208-13 | - | rbcL | 1389 | United States | - | 38.74, -120.74 | |
| GBVQ2208-13 | - | matK | 1545 | United States | - | 38.74, -120.74 |
Literature
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