Polygonum aviculare
TaxID: 137693
Basic Information
Polygonum aviculare
Doorweed, Wireweed
Polygonum aviculare or common knotgrass is a plant related to buckwheat and dock. It is also called prostrate knotweed, birdweed, pigweed and lowgrass. It is an annual found in fields and wasteland, with white flowers from June to October. It is widespread across many countries in temperate regions, apparently native to Eurasia, naturalized in temperate parts of the Southern Hemisphere.
from Wikipedia
Taxonomic Information
Eukaryota
Streptophyta
Magnoliopsida
Caryophyllales
Polygonaceae
Polygonum
aviculare
Unclassified
Species
nan
d__Eukaryota;p__Streptophyta;c__Magnoliopsida;o__Caryophyllales;f__Polygonaceae;g__Polygonum;s__Polygonum aviculare
nan
Weeds
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (97 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Afghanistan | Present | — |
| Albania | Present | — |
| Algeria | Present | — |
| Andorra | Present | — |
| Argentina | Present | — |
| Armenia | Present | — |
| Australia | Present | — |
| Austria | Present | — |
| Azerbaijan | Present | — |
| Belgium | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_934047395.1 | Scaffold | 360 | 10315 | 16612 | - |
|
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dcPolAvic1.1 alternate haplotype |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR18011482 | Vegetative | vegetative period | - | 28617303 | China: Yunan | |
|
PRJNA804590 SRX14165813 SRP359671 general Polygonum aviculare transcriptome raw data cDNA wild {'age': '1', 'tissue': 'Vegetative', 'ecotype': 'climatic', 'isolate': 'leaves', 'cultivar': 'wild', 'dev_stage': 'vegetative period', 'collected_by': 'Lushui Zhang & Xingxing Mao', 'geo_loc_name': 'China: Yunan', 'biosamplemodel': 'Plant'} |
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| ERR9435018 | - | - | hermaphrodite and monoecious | 19874916 | - | |
|
PRJEB47299 ERX8976927 ERP131577 weed Illumina HiSeq 4000 paired end sequencing Illumina sequencing of sample accession SAMEA7522671 for study accession PRJEB47299. This is part of an Illumina multiplexed sequencing run (44268_5). This submission includes reads tagged with the sequence CCGTTAGT. {'gal': 'Royal Botanic Gardens Kew', 'sex': 'hermaphrodite and monoecious', 'tolid': 'dcPolAvic1', 'habitat': 'weed', 'lifestage': 'vegetative structure', 'broker name': 'COPO', 'external id': 'SAMEA7522671', 'sample name': '5fa2a9367b781800011452a8', 'specimen id': 'KDTOL10108', 'collected by': 'MAARTEN J. M. CHRISTENHUSZ', 'insdc status': 'public', 'project name': 'DTOL', 'submitter id': '5fa2a9367b781800011452a8', 'identified by': 'Maarten J. M. Christenhusz', 'organism part': 'LEAF', 'collection date': '2020-09-08', 'ena-last-update': '2021-07-02T15:18:40Z', 'scientific_name': 'Polygonum aviculare', 'ena-first-public': '2020-11-04T14:52:13Z', 'specimen voucher': 'NOT PROVIDED', 'insdc center name': 'EarlhamInstitute', 'insdc last update': '2021-07-02T15:18:40Z', 'insdc first public': '2020-11-04T14:52:13Z', 'sample derived from': 'SAMEA7522628', 'collecting institution': 'ROYAL BOTANIC GARDENS KEW', 'identifier_affiliation': 'Independent', 'geographic location (latitude)': '51.4812', 'geographic location (elevation)': '7', 'geographic location (longitude)': '-0.2936', 'geographic location (country and/or sea)': 'United Kingdom', 'geographic location (region and locality)': 'Surrey | RBG Kew | weed in bed 124 under big maple Acer platanoides 1969-10345.'} |
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| ERR15551358 | - | - | hermaphrodite and monoecious | 45966018 | - | |
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PRJEB47299 ERX14954927 ERP131577 weed Illumina NovaSeq X paired end sequencing Illumina sequencing of sample accession SAMEA7522668 for study accession PRJEB47299. This submission includes reads tagged with the sequence CCAAAGTC. {'gal': 'Royal Botanic Gardens Kew', 'sex': 'hermaphrodite and monoecious', 'tolid': 'dcPolAvic1', 'habitat': 'weed', 'lifestage': 'vegetative structure', 'broker name': 'COPO', 'external id': 'SAMEA7522668', 'sample name': '5fa2a9367b781800011452a5', 'specimen id': 'KDTOL10108', 'collected by': 'MAARTEN J. M. CHRISTENHUSZ', 'insdc status': 'public', 'project name': 'DTOL', 'submitter id': '5fa2a9367b781800011452a5', 'identified by': 'Maarten J. M. Christenhusz', 'organism part': 'LEAF', 'collection date': '2020-09-08', 'ena-last-update': '2021-07-02T15:18:40Z', 'scientific_name': 'Polygonum aviculare', 'ena-first-public': '2020-11-04T14:52:13Z', 'specimen voucher': 'NOT PROVIDED', 'insdc center name': 'EarlhamInstitute', 'insdc last update': '2021-07-02T15:18:40Z', 'insdc first public': '2020-11-04T14:52:13Z', 'sample derived from': 'SAMEA7522628', 'collecting institution': 'ROYAL BOTANIC GARDENS KEW', 'identifier_affiliation': 'Independent', 'geographic location (latitude)': '51.4812', 'geographic location (elevation)': '7', 'geographic location (longitude)': '-0.2936', 'geographic location (country and/or sea)': 'United Kingdom', 'geographic location (region and locality)': 'Surrey | RBG Kew | weed in bed 124 under big maple Acer platanoides 1969-10345.'} |
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DNA Barcodes (103 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| YNPBP778-23 | - | trnL-F | 589 | United States | 2023-07-14 | 45.02471, -110.70064 | |
| YNPBP778-23 | - | trnH-psbA | 421 | United States | 2023-07-14 | 45.02471, -110.70064 | |
| YNPBP778-23 | - | rbcL | 553 | United States | 2023-07-14 | 45.02471, -110.70064 | |
| YNPBP778-23 | - | matK | 803 | United States | 2023-07-14 | 45.02471, -110.70064 | |
| WAT361-12 | - | rbcLa | 553 | Canada | 2012-06-06 | 43.5485, -80.2503 | |
| WAT166-12 | - | rbcLa | 553 | Canada | 2006-11-29 | - | |
| VEMSH385-13 | - | rbcLa | 552 | Canada | 2012-08-23 | 45.551, -73.172 | |
| VEMSH358-13 | - | rbcLa | 536 | Canada | 2012-08-07 | 45.535, -73.149 | |
| VEMSH358-13 | - | matK | 747 | Canada | 2012-08-07 | 45.535, -73.149 | |
| VEMSH276-13 | - | rbcLa | 570 | Canada | 2012-07-04 | 45.535, -73.149 |
Literature
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