Colletotrichum falcatum
TaxID: 129314
Basic Information
Colletotrichum falcatum
Red Rot of Sugarcane
Glomerella tucumanensis is a species of fungus in the family Glomerellaceae. It is a pathogen of sugarcane responsible for the disease known as red rot of sugarcane, this disease impacts sugarcane production in South and South-East Asia and has spread to 69 countries. It has been responsible for the elimination of many commercial varieties of sugarcane.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Glomerellales
Glomerellaceae
Colletotrichum
falcatum
nan
Species
nan
k__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Glomerellales;f__Glomerellaceae;g__Colletotrichum;s__Colletotrichum falcatum
nan
Fungal organisms
Photos (2 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (3 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (15 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Argentina | Present | — |
| Australia | Present | — |
| Brazil | Present | — |
| China | Present | — |
| Cook Islands | Present | — |
| Dominican Republic | Present | — |
| Spain | Present | — |
| Fiji | Present | — |
| United Kingdom | Present | — |
| India | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_001484525.1 | Scaffold | 48 | 16 | 29 | - |
|
|
|
ASM148452v1 |
|||||||
Transcriptomes (2 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR1765657 | - | - | - | 53410513 | India | |
|
PRJNA272832 SRX847179 SRP052561 fungi Screening the pathogenome – Prelude on expressed transcripts and genome of Colletotrichum falcatum Cf671 {'host': 'Sugarcane', 'strain': 'Cf671', 'lab_host': 'ICAR-Sugarcane Breeding Institute', 'sample_type': 'Fungus', 'collected_by': 'R.Viswanathan', 'geo_loc_name': 'India', 'identified_by': 'R.Viswanathan', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '1996-06-30', 'isolation_source': 'CoC 671', 'host_tissue_sampled': 'Sugarcane stalk'} |
||||||
| SRR5166051 | - | - | - | 65198204 | missing | |
|
PRJNA262215 SRX2483011 SRP096443 fungi Colletotrichum falcatum MAFF306170 Transcriptome MAFF306170 {'strain': 'MAFF306170', 'biosamplemodel': 'MIGS.eu'} |
||||||
Literature
Fetching literature from NCBI PubMed...
Failed to fetch literature