Rosellinia necatrix
TaxID: 77044
Basic Information
Rosellinia necatrix
Fungus, podredumbre de las raices
Rosellinia necatrix is a fungal plant pathogen infecting several hosts including apples, apricots, avocados, cassava, strawberries, pears, hop. citruses and Narcissus, causing white root rot.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Xylariales
Xylariaceae
Rosellinia
necatrix
nan
Species
nan
k__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Xylariales;f__Xylariaceae;g__Rosellinia;s__Rosellinia necatrix
nan
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (3 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Persea americana | Host |
| Pistacia vera | Host |
| Vitis vinifera | Host |
Quarantine Status (11 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Canada | Quarantine pests | — |
| Egypt | Abesent | — |
| Indonesia | Absent | — |
| Sri Lanka | Quarantine pests | — |
| Malaysia | Quarantine pests | — |
| Nicaragua | Absent | — |
| Nepal | Quarantine pests | — |
| Pakistan | Quarantine pests | — |
| Peru | Absent | — |
| Paraguay | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_001445595.3 | Scaffold | 44 | 138 | 549 | - |
|
|
|
Rnecatrix_2.0 |
|||||||
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR9679877 | mycelium | - | - | 40084525 | - | |
|
PRJNA554511 SRX6440083 SRP214555 fungi GSM3940408: RnPDA3; Rosellinia necatrix; RNA-Seq CH53 {'strain': 'CH53', 'tissue': 'mycelium', 'genotype': 'wild type', 'treatment': 'grown on potato dextrose agar (PDA)', 'source_name': 'mycelium'} |
||||||
| SRR9679872 | mycelium | - | - | 46345407 | - | |
|
PRJNA554511 SRX6440084 SRP214555 fungi GSM3940403: RnRC1; Rosellinia necatrix; RNA-Seq CH53 {'strain': 'CH53', 'tissue': 'mycelium', 'genotype': 'wild type', 'treatment': 'grown on avocado roots', 'source_name': 'mycelium'} |
||||||
| SRR9679873 | mycelium | - | - | 43672443 | - | |
|
PRJNA554511 SRX6440085 SRP214555 fungi GSM3940404: RnRC2; Rosellinia necatrix; RNA-Seq CH53 {'strain': 'CH53', 'tissue': 'mycelium', 'genotype': 'wild type', 'treatment': 'grown on avocado roots', 'source_name': 'mycelium'} |
||||||
DNA Barcodes (24 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| GBXYL906-13 | - | ITS | 549 | - | - | - | |
| GBXYL846-13 | - | ITS | 548 | Japan | 2000-05-01 | 36.767387, 137.46935 | |
| GBXYL845-13 | - | ITS | 477 | Japan | 2000-05-01 | 36.767387, 137.46935 | |
| GBXYL844-13 | - | ITS | 548 | Japan | 2000-05-01 | 36.767387, 137.46935 | |
| GBXYL843-13 | - | ITS | 548 | Japan | 2000-05-01 | 36.767387, 137.46935 | |
| GBXYL842-13 | - | ITS | 548 | Japan | 2000-05-01 | 36.767387, 137.46935 | |
| GBXYL841-13 | - | ITS | 548 | Japan | 2000-05-01 | 36.767387, 137.46935 | |
| GBXYL838-13 | - | ITS | 549 | Japan | - | 36.767387, 137.46935 | |
| GBXYL837-13 | - | ITS | 551 | - | - | - | |
| GBXYL755-13 | - | ITS | 550 | - | - | - |
Literature
Fetching literature from NCBI PubMed...
Failed to fetch literature