Ralstonia syzygii
TaxID: 28097
Basic Information
Ralstonia syzygii
Sumatra Disease
Ralstonia syzygii is a species of bacteria in the family Burkholderiaceae. This bacterium is the plant pathogen responsible for Sumatra disease that affects the cloves (Syzygium) in Indonesia. It is transmitted by Hemiptera insects of the spittle group (superfamily Cercopoidea). This species is classified in the species complex Ralstonia solanacearum, which also includes certain Asian strains of R. solanacearum, a soil bacterium which infects many species of plants, and bacteria from the blood disease of banana (BDB). These three plant pathogenic bacteria are very closely related, despite significant differences biologically, and are grouped in the subgroup phylotype IV species complex Ralstonia solanacearum.
from Wikipedia
Taxonomic Information
Bacteria
Pseudomonadota
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
syzygii
Unclassified
Species
nan
d__Bacteria;p__Pseudomonadota;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia;s__Ralstonia syzygii
nan
Prokaryotes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (15 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Asclepias curassavica | Host |
| Canna indica | Host |
| Capsicum annuum | Host |
| Datura stramonium | Host |
| Eucalyptus urophylla | Host |
| Heliconia | Host |
| Musa | Host |
| Musa acuminata | Host |
| Musa balbisiana | Host |
| Musa textilis | Host |
Quarantine Status (4 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (11 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Absent | |
| Brazil | Present | |
| China | Present | |
| Indonesia | Present | — |
| India | Present | — |
| Japan | Present | |
| Republic of Korea | Present | — |
| Mauritius | Present | — |
| Malaysia | Present | |
| Philippines | Present | — |
Genomes (2 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_018243215.1 | Complete Genome | 5 | 3648 | 3648 | - |
|
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|
ASM1824321v1 |
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| GCF_015910595.1 | Contig | 5 | 3114 | 3114 | - |
|
|
|
ASM1591059v1 |
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Transcriptomes (2 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR14414834 | - | - | - | 10576731 | - | |
|
PRJNA580360 SRX10766266 SRP227471 Host extract medium Ralstonia syzygii subsp. celebesensis isolate UGMSS_Db01 has been cultured on a modified axenic medium with an additional 20% host extract (Musa balbisiana cultivar Kepok) UGMSS_Db01 cultured on a modified Axenic medium with 20% host extract {'host': 'Musa balbisiana cultivar Kepok', 'strain': 'UGMSS_Db01', 'isolate': 'UGMSS_Db01 cultured on a modified Axenic medium with 20% host extract', 'lat_lon': '7.835059 S 110.388721 E', 'sub_species': 'celebesensis', 'collected_by': 'Ady Bayu Prakoso', 'geo_loc_name': 'Indonesia: Yogyakarta', 'host_disease': 'Blood disease of banana', 'biosamplemodel': 'Pathogen.cl', 'collection_date': '2021', 'host_description': 'Musa balbisiana cultivar Kepok', 'isolation_source': 'isolated from infected banana fruit with green skin, the plantation is near the house'} |
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| SRR14414833 | - | - | - | 13157761 | - | |
|
PRJNA580360 SRX10766267 SRP227471 Axenic medium Ralstonia syzygii subsp. celebesensis isolate UGMSS_Db01 has been cultured on axenic medium UGMSS_Db01 cultured on Axenic medium {'host': 'Musa balbisiana cultivar Kepok', 'strain': 'UGMSS_Db01', 'isolate': 'UGMSS_Db01 cultured on Axenic medium', 'lat_lon': '7.835059 S 110.388721 E', 'sub_species': 'celebesensis', 'collected_by': 'Ady Bayu Prakoso', 'geo_loc_name': 'Indonesia: Yogyakarta', 'host_disease': 'Blood disease of banana', 'biosamplemodel': 'Pathogen.cl', 'collection_date': '2021', 'host_description': 'Musa balbisiana cultivar Kepok', 'isolation_source': 'isolated from infected banana fruit with green skin, the plantation is near the house'} |
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Literature
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