Colletotrichum lini
TaxID: 500171
Basic Information
Colletotrichum lini
Anthracnose of Flax, linantraknos
Colletotrichum lini is a fungal plant pathogen which causes anthracnose in flax.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Glomerellales
Glomerellaceae
Colletotrichum
lini
Undefined
Species
nan
d__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Glomerellales;f__Glomerellaceae;g__Colletotrichum;s__Colletotrichum lini
nan
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (1 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Linum usitatissimum | Host |
Quarantine Status (32 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Austria | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Belgium | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Bulgaria | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Brazil | A1 list | 2018 |
| Switzerland | Regulated non-quarantine pest | 2019 |
| Cyprus | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Czechia | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Germany | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Denmark | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Egypt | A1 list | 2018 |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_034638215.1 | Contig | 54 | 5513 | 5513 | - |
|
|
|
EIMB_Clini_771_1.0 |
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Transcriptomes (1 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR30207743 | - | - | - | 3724630 | not applicable | |
|
PRJNA929545 SRX25670782 SRP420129 fungi Illumina transcriptome sequencing of Colletotrichum lini strain #394-2 mycelium Library was prepared using the tagmentation-based protocol and sequenced with a read length of 51+51 nucleotides 394-2 {'host': 'Linum usitatissimum', 'strain': '394-2', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.plant-associated', 'collection_date': 'not collected'} |
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Literature
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