Frankliniella occidentalis
TaxID: 133901
Basic Information
Frankliniella occidentalis
Western Flower Thrips, Western flower thrips, western flower thrips
The western flower thrips is an invasive pest insect in agriculture. This species of thrips is native to the Southwestern United States but has spread to other continents, including Europe, Australia , and South America via transport of infested plant material.
from Wikipedia
Taxonomic Information
Eukaryota
Arthropoda
Insecta
Thysanoptera
Thripidae
Frankliniella
occidentalis
nan
Species
nan
k__Eukaryota;p__Arthropoda;c__Insecta;o__Thysanoptera;f__Thripidae;g__Frankliniella;s__Frankliniella occidentalis
nan
Arthropods
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (37 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Allium | Host |
| Allium cepa | Host |
| Amaranthus hybridus | Host |
| Amaranthus spinosus | Host |
| Beta vulgaris | Host |
| Capsicum annuum | Host |
| Carthamus tinctorius | Host |
| Chenopodium quinoa | Host |
| Cucumis sativus | Host |
| Cucurbita pepo | Host |
Quarantine Status (32 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Albania | Present | — |
| Armenia | Absent | — |
| Azerbaijan | A2 list | 2024 |
| Bahrain | Quarantine pests | 2003 |
| Belarus | Present | — |
| Cuba | Absent | — |
| Dominican Republic | Quarantine pests | — |
| Egypt | Abesent | 2018 |
| EPPO A2 | Present | — |
| Georgia | Absent | 2018 |
Distribution (97 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Albania | Present | — |
| Algeria | Present | — |
| Argentina | Present | — |
| Armenia | Present | — |
| Australia | Present | |
| Austria | Present | — |
| Azerbaijan | Present | — |
| Belgium | Present | — |
| Burkina Faso | Present | — |
| Bulgaria | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (2 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_000697945.3 | Scaffold | 405 | 6 | 956 | 0.992684722% |
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Focc_3.1 |
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| GCA_035583395.1 | Chromosome | 405 | 5 | 18100 | - |
|
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IPM-FO01 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR36500115 | entire body | - | - | 30371576 | China: Beijing | |
|
PRJNA1390616 SRX31521308 SRP656343 insect RNA-Seq of Frankliniella occidentalis: adult Paired-end sequencing libraries were constructed from insect tissues using the Illumina TruSeq Stranded mRNA Library Prep Kit. Total RNA was extracted, mRNA was enriched, fragmented, and converted to cDNA, then adaptors were ligated for Illumina HiSeq 2000 sequencing to analyze gene expression profiles. {'host': 'Phaseolus vulgaris L.', 'temp': '4', 'tissue': 'entire body', 'geo_loc_name': 'China: Beijing', 'biosamplemodel': 'Invertebrate', 'collection_date': '2020-06-08'} |
||||||
| SRR36500114 | entire body | - | - | 31279188 | China: Beijing | |
|
PRJNA1390616 SRX31521309 SRP656343 insect RNA-Seq of Frankliniella occidentalis: adult Paired-end sequencing libraries were constructed from insect tissues using the Illumina TruSeq Stranded mRNA Library Prep Kit. Total RNA was extracted, mRNA was enriched, fragmented, and converted to cDNA, then adaptors were ligated for Illumina HiSeq 2000 sequencing to analyze gene expression profiles. {'host': 'Phaseolus vulgaris L.', 'temp': '5', 'tissue': 'entire body', 'geo_loc_name': 'China: Beijing', 'biosamplemodel': 'Invertebrate', 'collection_date': '2020-06-08'} |
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| SRR36500113 | entire body | - | - | 28324505 | China: Beijing | |
|
PRJNA1390616 SRX31521310 SRP656343 insect RNA-Seq of Frankliniella occidentalis: adult Paired-end sequencing libraries were constructed from insect tissues using the Illumina TruSeq Stranded mRNA Library Prep Kit. Total RNA was extracted, mRNA was enriched, fragmented, and converted to cDNA, then adaptors were ligated for Illumina HiSeq 2000 sequencing to analyze gene expression profiles. {'host': 'Phaseolus vulgaris L.', 'temp': '6', 'tissue': 'entire body', 'geo_loc_name': 'China: Beijing', 'biosamplemodel': 'Invertebrate', 'collection_date': '2020-06-08'} |
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DNA Barcodes (4363 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| YGEN875-22 | BOLD:ACB4865 | COI-5P | 640 | Canada | 2021-07-09 | 60.852, -135.471 | |
| YGEN2275-22 | BOLD:ACZ4231 | COI-5P | 562 | Canada | 2021-07-28 | 60.111, -128.825 | |
| YGEN2171-22 | BOLD:ACZ4231 | COI-5P | 649 | Canada | 2021-07-31 | 60.056, -128.58 | |
| YGEN2170-22 | BOLD:ACB4865 | COI-5P | 641 | Canada | 2021-07-31 | 60.056, -128.58 | |
| YGEN2168-22 | BOLD:ACZ4231 | COI-5P | 648 | Canada | 2021-07-31 | 60.056, -128.58 | |
| YGEN2167-22 | BOLD:ACZ4231 | COI-5P | 642 | Canada | 2021-07-31 | 60.056, -128.58 | |
| YGEN2166-22 | BOLD:ACZ4231 | COI-5P | 650 | Canada | 2021-07-31 | 60.056, -128.58 | |
| YGEN2165-22 | BOLD:ACB4865 | COI-5P | 650 | Canada | 2021-07-31 | 60.056, -128.58 | |
| YGEN2164-22 | BOLD:ACZ4231 | COI-5P | 648 | Canada | 2021-07-31 | 60.056, -128.58 | |
| YGEN2157-22 | BOLD:ACB4865 | COI-5P | 649 | Canada | 2021-07-31 | 60.056, -128.58 |
Literature
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