Drosophila simulans
TaxID: 7240
Basic Information
Drosophila simulans
Fly, Similar Fruit Fly
Drosophila simulans is a species of fly closely related to D. melanogaster, belonging to the same melanogaster species subgroup. Its closest relatives are D. mauritiana and D. sechellia.
from Wikipedia
Taxonomic Information
Metazoa
Arthropoda
Insecta
Diptera
Drosophilidae
Drosophila
simulans
unclassified
Species
nan
k__Metazoa;p__Arthropoda;c__Insecta;o__Diptera;f__Drosophilidae;g__Drosophila;s__Drosophila simulans
nan
Arthropods
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Panama | Quarantine pests | — |
Distribution (33 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| Austria | Present | — |
| Brazil | Present | — |
| Canada | Present | — |
| Switzerland | Present | — |
| China | Present | — |
| Costa Rica | Present | — |
| Cyprus | Present | — |
| Germany | Present | — |
| Denmark | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (16 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_016746395.2 | Chromosome | - | - | - | - | - |
|
|
Prin_Dsim_3.1 |
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| GCF_000754195.2 | Chromosome | - | - | - | - | - |
|
|
ASM75419v2 |
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| GCF_000259055.1 | Chromosome | - | - | - | - | - |
|
|
dsim_caf1 |
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| GCA_927718705.1 | Scaffold | - | - | - | - | - |
|
|
dssj9_genome_assembly |
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| GCA_927718675.1 | Scaffold | - | - | - | - | - |
|
|
dssj27_genome_assembly |
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| GCA_927717605.1 | Scaffold | - | - | - | - | - |
|
|
dsgoth613_genome_assembly |
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| GCA_927717595.2 | Scaffold | - | - | - | - | - |
|
|
dsgoth31_corrected |
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| GCA_047115815.1 | Chromosome | - | - | - | - | - |
|
|
ASM4711581v1 |
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| GCA_018904415.1 | Scaffold | - | - | - | - | - |
|
|
ASM1890441v1 |
|||||||
| GCA_016746395.1 | Chromosome | 131 | 22319 | 23399 | - |
|
|
|
|
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR34671852 | Testis | - | male | 5554659 | Brazil | |
|
PRJNA1188117 SRX29807816 SRP601681 insect Dsim_PM_Rep1-lane1 Testes were dissected from 610-day-old virgin males and stored in RNAlater. Total RNA was extracted using the PicoPure RNA Isolation Kit and preserved in RNAstable. Library preparation, quality control, and sequencing were performed at the University of Chicago Genomics Facility using the Agilent Bioanalyzer 2100. y_sim {'age': '4-6 days adult', 'sex': 'male', 'strain': 'y_sim', 'tissue': 'Testis', 'cell_type': 'Sample of post meiosis, replicate 1, lane 1', 'geo_loc_name': 'Brazil', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2019-03-12'} |
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| SRR34671851 | Testis | - | male | 14621197 | Brazil | |
|
PRJNA1188117 SRX29807817 SRP601681 insect Dsim_Meiosis_Rep3-lane2 Testes were dissected from 610-day-old virgin males and stored in RNAlater. Total RNA was extracted using the PicoPure RNA Isolation Kit and preserved in RNAstable. Library preparation, quality control, and sequencing were performed at the University of Chicago Genomics Facility using the Agilent Bioanalyzer 2100. y_sim {'age': '4-6 days adult', 'sex': 'male', 'strain': 'y_sim', 'tissue': 'Testis', 'cell_type': 'Sample of meiosis, replicate 3, lane 2', 'geo_loc_name': 'Brazil', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2019-03-08'} |
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| SRR34671850 | Testis | - | male | 5074936 | Brazil | |
|
PRJNA1188117 SRX29807818 SRP601681 insect Dsim_Meiosis_Rep3-lane2 Testes were dissected from 610-day-old virgin males and stored in RNAlater. Total RNA was extracted using the PicoPure RNA Isolation Kit and preserved in RNAstable. Library preparation, quality control, and sequencing were performed at the University of Chicago Genomics Facility using the Agilent Bioanalyzer 2100. y_sim {'age': '4-6 days adult', 'sex': 'male', 'strain': 'y_sim', 'tissue': 'Testis', 'cell_type': 'Sample of meiosis, replicate 3, lane 1', 'geo_loc_name': 'Brazil', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2019-03-08'} |
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Literature
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