Colletotrichum higginsianum
TaxID: 80884
Basic Information
Colletotrichum higginsianum
Leaf Spo of Turnip
Colletotrichum higginsianum is an ascomycete pathogen that causes anthracnose disease on many plants in the Brassicaceae, including Arabidopsis thaliana and many cultivated forms of Brassica and Raphanus.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Glomerellales
Glomerellaceae
Colletotrichum
higginsianum
Undefined
Species
nan
d__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Glomerellales;f__Glomerellaceae;g__Colletotrichum;s__Colletotrichum higginsianum
nan
Fungal organisms
Photos (2 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (4 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (14 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| Canada | Present | — |
| Chile | Present | — |
| Iceland | Present | — |
| Japan | Present | — |
| Republic of Korea | Present | — |
| Madagascar | Present | — |
| Portugal | Present | — |
| Sweden | Present | — |
| Thailand | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_000313795.2 | Scaffold | 49 | 6 | 6 | - |
|
|
|
ASM31379v2 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR1630221 | mycelia | - | - | 15788642 | - | |
|
PRJNA264846 SRX743339 SRP049260 fungi GSM1531883: plasmid_3_RNAseq; Colletotrichum higginsianum IMI 349063; RNA-Seq IMI 349063A {'strain': 'IMI 349063A', 'tissue': 'mycelia', 'genotype': 'wild-type + pGKO2', 'source_name': 'Mycelia'} |
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| SRR1630222 | mycelia | - | - | 9494316 | - | |
|
PRJNA264846 SRX743340 SRP049260 fungi GSM1531884: WT_1_RNAseq; Colletotrichum higginsianum IMI 349063; RNA-Seq IMI 349063A {'strain': 'IMI 349063A', 'tissue': 'mycelia', 'genotype': 'wild-type', 'source_name': 'Mycelia'} |
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| SRR1630223 | mycelia | - | - | 6718206 | - | |
|
PRJNA264846 SRX743341 SRP049260 fungi GSM1531885: WT_2_RNAseq; Colletotrichum higginsianum IMI 349063; RNA-Seq IMI 349063A {'strain': 'IMI 349063A', 'tissue': 'mycelia', 'genotype': 'wild-type', 'source_name': 'Mycelia'} |
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Literature
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