Microtus arvalis
TaxID: 47230
Basic Information
Microtus arvalis
Common Vole, common vole
The common vole (Microtus arvalis) is a European rodent.
from Wikipedia
Taxonomic Information
Eukaryota
Chordata
Mammalia
Rodentia
Cricetidae
Microtus
arvalis
nan
Species
nan
k__Eukaryota;p__Chordata;c__Mammalia;o__Rodentia;f__Cricetidae;g__Microtus;s__Microtus arvalis
nan
Vertebrates
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Moldova | Quarantine pests | — |
Distribution (44 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Afghanistan | Present | — |
| Andorra | Present | — |
| Armenia | Present | — |
| Austria | Present | — |
| Belgium | Present | — |
| Bulgaria | Present | — |
| Bosnia and Herzegovina | Present | — |
| Belarus | Present | — |
| Switzerland | Present | — |
| China | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_007455615.1 | Scaffold | 2620 | 34 | 52 | - |
|
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ASM745561v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR36384156 | liver | - | female | 22377450 | Russia: Krasnodar area | |
|
PRJNA1378222 SRX31412587 SRP653807 general Microtus arvalis: RNA-seq Total RNA was extracted using Aurum total RNA mini kit (Bio-Rad, USA) according to the manufacturers instructions. RNA quality was assessed using a NanoDrop 2000 spectrophotometer (Thermo Fisher Scientific, USA). The transcriptome library was constructed and sequenced by the Novogene on the DNBSEQ sequencing platform with a paired-end 150bp layout Microtus arvalis #1 {'age': 'adult', 'sex': 'female', 'tissue': 'liver', 'isolate': 'Microtus arvalis #1', 'sample_type': 'liver cell rna', 'geo_loc_name': 'Russia: Krasnodar area', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2024-06'} |
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| SRR36384155 | liver | - | female | 20531979 | Russia: Krasnodar area | |
|
PRJNA1378222 SRX31412588 SRP653807 general Microtus arvalis: RNA-seq Total RNA was extracted using Aurum total RNA mini kit (Bio-Rad, USA) according to the manufacturers instructions. RNA quality was assessed using a NanoDrop 2000 spectrophotometer (Thermo Fisher Scientific, USA). The transcriptome library was constructed and sequenced by the Novogene on the DNBSEQ sequencing platform with a paired-end 150bp layout Microtus arvalis #2 {'age': 'adult', 'sex': 'female', 'tissue': 'liver', 'isolate': 'Microtus arvalis #2', 'sample_type': 'liver cell rna', 'geo_loc_name': 'Russia: Krasnodar area', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2024-06'} |
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| SRR36384154 | liver | - | female | 23906308 | Russia: Krasnodar area | |
|
PRJNA1378222 SRX31412589 SRP653807 general Microtus arvalis: RNA-seq Total RNA was extracted using Aurum total RNA mini kit (Bio-Rad, USA) according to the manufacturers instructions. RNA quality was assessed using a NanoDrop 2000 spectrophotometer (Thermo Fisher Scientific, USA). The transcriptome library was constructed and sequenced by the Novogene on the DNBSEQ sequencing platform with a paired-end 150bp layout Microtus arvalis #3 {'age': 'adult', 'sex': 'female', 'tissue': 'liver', 'isolate': 'Microtus arvalis #3', 'sample_type': 'liver cell rna', 'geo_loc_name': 'Russia: Krasnodar area', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2024-06'} |
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DNA Barcodes (102 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| TERVM008-23 | - | CYTB | 1106 | Moldova | 2021-12-09 | 47.021, 28.718 | |
| TERVM007-23 | - | CYTB | 1106 | Moldova | 2021-09-09 | 46.806, 28.929 | |
| TERVM006-23 | - | CYTB | 1106 | Moldova | 2021-09-09 | 46.806, 28.929 | |
| TERVM002-23 | - | CYTB | 1106 | Moldova | 2021-09-09 | 46.806, 28.929 | |
| TERVM001-23 | - | CYTB | 1106 | Moldova | 2021-09-07 | 46.926, 28.825 | |
| SMGEO338-23 | BOLD:AES1147 | COI-5P | 658 | Georgia | 2022-06-30 | 41.17, 43.737 | |
| SMGEO337-23 | BOLD:AES1147 | COI-5P | 658 | Georgia | 2022-06-30 | 41.17, 43.737 | |
| SMGEO042-22 | BOLD:AES1147 | COI-5P | 564 | Georgia | 2020-06-10 | 41.736, 44.379 | |
| SKMZM335-07 | BOLD:AAC8007 | COI-5P | 654 | Russia | 2007-08-21 | 53.81, 39.53 | |
| SKMZM194-07 | BOLD:AAC8006 | COI-5P | 657 | Russia | 2005-09-08 | 61.19, 42.93 |
Literature
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