Diaporthe citri
TaxID: 83186
Basic Information
Diaporthe citri
Melanose
Diaporthe citri is a plant pathogen infecting citruses.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Diaporthales
Diaporthaceae
Diaporthe
citri
Undefined
Species
nan
d__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Diaporthales;f__Diaporthaceae;g__Diaporthe;s__Diaporthe citri
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (5 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Citrus | Host |
| Citrus maxima | Host |
| Citrus reticulata | Host |
| Citrus sinensis | Host |
| Mangifera indica | Host |
Quarantine Status (3 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (74 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Algeria | Present | — |
| Argentina | Present | — |
| American Samoa | Present | — |
| Australia | Present | |
| Bangladesh | Present | — |
| Bolivia (Plurinational State of) | Present | — |
| Brazil | Present | |
| Barbados | Present | — |
| Cambodia | Present | — |
| Chile | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_014595645.1 | Contig | 63 | 5472 | 5472 | - |
|
|
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ASM1459564v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR31867053 | - | - | - | 18284668 | not collected | |
|
PRJNA1205400 SRX27226178 SRP554817 fungi RNA-Seq of Diaporthe citri Treated not collected {'host': 'citrus', 'strain': 'not collected', 'isolate': 'not collected', 'sample_type': 'mycelia', 'geo_loc_name': 'not collected', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': 'not collected', 'isolation_source': 'not collected', 'biological replication': 'Treated biological replication 1'} |
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| SRR31867052 | - | - | - | 21169382 | not collected | |
|
PRJNA1205400 SRX27226179 SRP554817 fungi RNA-Seq of Diaporthe citri Treated not collected {'host': 'citrus', 'strain': 'not collected', 'isolate': 'not collected', 'sample_type': 'mycelia', 'geo_loc_name': 'not collected', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': 'not collected', 'isolation_source': 'not collected', 'biological replication': 'Treated biological replication 2'} |
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| SRR31867051 | - | - | - | 19636535 | not collected | |
|
PRJNA1205400 SRX27226180 SRP554817 fungi RNA-Seq of Diaporthe citri Treated not collected {'host': 'citrus', 'strain': 'not collected', 'isolate': 'not collected', 'sample_type': 'mycelia', 'geo_loc_name': 'not collected', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': 'not collected', 'isolation_source': 'not collected', 'biological replication': 'Treated biological replication 3'} |
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Literature
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