Xanthomonas citri pv. mangiferaeindicae
TaxID: 454594
Basic Information
Xanthomonas citri pv. mangiferaeindicae
Bacterial Rot of Mango, agent of mango bacterial black spot
nan
from Wikipedia
Taxonomic Information
Bacteria
Pseudomonadota
Gammaproteobacteria
Lysobacterales
Lysobacteraceae
Xanthomonas
citri
pv. mangiferaeindicae
Under_Species
nan
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Lysobacterales;f__Lysobacteraceae;g__Xanthomonas;s__Xanthomonas citri
nan
Prokaryotes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (17 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Angola | Quarantine pests | — |
| Burkina Faso | Present | — |
| Bahrain | Quarantine pests | 2003 |
| Cambodia | Quarantine pests | — |
| China | Quarantine pests | 2021 |
| Ecuador | Quarantine pests | — |
| Egypt | Abesent | 2018 |
| Guatemala | Absent | — |
| Iran | A1 list | 2018 |
| Sri Lanka | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (2 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_002920975.4 | Chromosome | 5 | 543 | 5255 | - |
|
|
|
ASM292097v4 |
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| GCA_002240395.1 | Complete Genome | 3 | 3865 | 3865 | - |
|
|
|
ASM224039v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR27960921 | - | - | - | 30332169 | - | |
|
SRX23617595 SRP489441 Xcm-LG56-10_RbmL_WT_RNA_seq1 LG56-10 {'title': 'Xcm-LG56-10_RbmL_WT_RNA_seq', 'strain': 'LG56-10', 'genotype': 'WT', 'molecule': 'total_RNA', 'growth_protocol': 'Moka medium Exponential phase', 'extract_protocol': 'mirvana, Ambion Ribodepletion Sizing more than 200pb Ribominus'} |
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| SRR27960922 | - | - | - | 35207268 | - | |
|
SRX23617596 SRP489441 Xcm-LG56-10_RbmL_WT_RNA_seq2 LG56-10 {'title': 'Xcm-LG56-10_RbmL_WT_RNA_seq', 'strain': 'LG56-10', 'genotype': 'WT', 'molecule': 'total_RNA', 'growth_protocol': 'Moka medium Exponential phase', 'extract_protocol': 'mirvana, Ambion Ribodepletion Sizing more than 200pb Ribominus'} |
||||||
| SRR27960923 | - | - | - | 34895036 | - | |
|
SRX23617597 SRP489441 Xcm-LG56-10_RbmL_WT_RNA_seq3 LG56-10 {'title': 'Xcm-LG56-10_RbmL_WT_RNA_seq', 'strain': 'LG56-10', 'genotype': 'WT', 'molecule': 'total_RNA', 'growth_protocol': 'Moka medium Exponential phase', 'extract_protocol': 'mirvana, Ambion Ribodepletion Sizing more than 200pb Ribominus'} |
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Literature
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