Xanthomonas citri pv. fuscans
TaxID: 366649
Basic Information
Xanthomonas citri pv. fuscans
Common Blight of Bean
nan
from Wikipedia
Taxonomic Information
Bacteria
Pseudomonadota
Gammaproteobacteria
Lysobacterales
Lysobacteraceae
Xanthomonas
citri
pv. fuscans
Under_Species
nan
k__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Lysobacterales;f__Lysobacteraceae;g__Xanthomonas;s__Xanthomonas citri
nan
Prokaryotes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (2 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Eucalyptus sp. | Host |
| Phaseolus vulgaris | Host |
Quarantine Status (30 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Austria | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Belgium | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Bulgaria | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Switzerland | Regulated non-quarantine pest | 2019 |
| Cyprus | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Czechia | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Germany | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Denmark | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| EPPO A2 | Present | — |
| Spain | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
Distribution (21 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Belgium | Present | — |
| Bulgaria | Present | — |
| Bosnia and Herzegovina | Absent | — |
| Brazil | Present | |
| China | Present | |
| Colombia | Present | — |
| Spain | Present | — |
| Ethiopia | Present | — |
| Guatemala | Present | — |
| India | Present | — |
Genomes (2 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_000969685.2 | Complete Genome | 5 | 4981 | 4981 | - |
|
|
|
ASM96968v1 |
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| GCF_000741885.1 | Contig | 5 | 79 | 79 | - |
|
|
|
ASM74188v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR27960924 | - | - | - | 26996649 | - | |
|
SRX23617592 SRP489441 bacteria Xap-CFBP6996NF3_RbmL_pBBR-hrpX_RNA_seq1 CFBP6996NF3 {'title': 'Xap-CFBP6996NF3_RbmL_pBBR-hrpX_RNA_seq', 'strain': 'CFBP6996NF3', 'genotype': 'pBBR-hrpX, Rif-r', 'molecule': 'total_RNA', 'growth_protocol': 'Moka medium Exponential phase', 'extract_protocol': 'mirvana, Ambion Ribodepletion Sizing more than 200pb'} |
||||||
| SRR27960925 | - | - | - | 22196810 | - | |
|
SRX23617593 SRP489441 bacteria Xap-CFBP6996NF3_RbmL_pBBR-hrpX_RNA_seq2 CFBP6996NF3 {'title': 'Xap-CFBP6996NF3_RbmL_pBBR-hrpX_RNA_seq', 'strain': 'CFBP6996NF3', 'genotype': 'pBBR-hrpX, Rif-r', 'molecule': 'total_RNA', 'growth_protocol': 'Moka medium Exponential phase', 'extract_protocol': 'mirvana, Ambion Ribodepletion Sizing more than 200pb'} |
||||||
| SRR27960926 | - | - | - | 14346093 | - | |
|
SRX23617594 SRP489441 bacteria Xap-CFBP6996NF3_RbmL_pBBR-hrpX_RNA_seq3 CFBP6996NF3 {'title': 'Xap-CFBP6996NF3_RbmL_pBBR-hrpX_RNA_seq', 'strain': 'CFBP6996NF3', 'genotype': 'pBBR-hrpX, Rif-r', 'molecule': 'total_RNA', 'growth_protocol': 'Moka medium Exponential phase', 'extract_protocol': 'mirvana, Ambion Ribodepletion Sizing more than 200pb'} |
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Literature
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