Burkholderia plantarii
TaxID: 41899
Basic Information
Burkholderia plantarii
Bacterial Seedling Blight
Burkholderia plantarii is a Gram-negative soil bacterium. Its specific name comes from the Latin plantarium (seedbed). Burkholderia vandii is a synonym of this species, which was named after the orchid Vanda, where it was first found.
from Wikipedia
Taxonomic Information
Bacteria
Pseudomonadota
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Burkholderia
plantarii
Unclassified
Species
nan
d__Bacteria;p__Pseudomonadota;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia plantarii
nan
Prokaryotes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Burkina Faso | Absent | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_000835205.1 | Complete Genome | 7 | 4163 | 4163 | - |
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ASM83520v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR8944113 | - | - | - | 9833167 | - | |
|
PRJNA534192 SRX5724319 SRP193426 RNA-Seq of B. plantarii cDNA barcode ZJ171 {'strain': 'ZJ171', 'replicate': 'control-2', 'sample_type': 'cell culture', 'biosamplemodel': 'Microbe, viral or environmental', 'isolation_source': 'rice paddy'} |
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| SRR8944112 | - | - | - | 7580122 | - | |
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PRJNA534192 SRX5724320 SRP193426 RNA-Seq of B. plantarii cDNA barcode ZJ171 {'strain': 'ZJ171', 'replicate': 'control-1', 'sample_type': 'cell culture', 'biosamplemodel': 'Microbe, viral or environmental', 'isolation_source': 'rice paddy'} |
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| SRR8944110 | - | - | - | 6833198 | - | |
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PRJNA534192 SRX5724322 SRP193426 RNA-Seq of B. plantarii cDNA barcode ZJ171 {'strain': 'ZJ171', 'replicate': 'control-3', 'sample_type': 'cell culture', 'biosamplemodel': 'Microbe, viral or environmental', 'isolation_source': 'rice paddy'} |
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Literature
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Failed to fetch literature