Dendroctonus ponderosae
TaxID: 77166
Basic Information
Dendroctonus ponderosae
Mountain Pine Beetle, mountain pine beetle
The mountain pine beetle (Dendroctonus ponderosae) is a species of bark beetle native to the forests of western North America from Mexico to central British Columbia. It has a hard black exoskeleton, and measures approximately 5 millimetres (1?4 in), about the size of a grain of rice. In western North America, an outbreak of the beetle and its microbial associates affected wide areas of lodgepole pine forest, including more than 160,000 km2 (40 million acres) of forest in British Columbia. The outbreak in the Rocky Mountain National Park in Colorado began in 1996 and has caused the destruction of millions of acres/hectares of ponderosa and lodgepole pine trees. At the peak of the outbreak in 2009, over 16,000 km2 (4.0 million acres) were affected. The outbreak then declined due to better environmental conditions, but many vulnerable trees had already been destroyed. Mountain pine beetles inhabit ponderosa, whitebark, lodgepole, Scots, jack, limber, Rocky Mountain bristlecone, and Great Basin bristlecone pine trees. Normally, these insects play an important role in the life of a forest, attacking old or weakened trees, and speeding development of a younger forest. However, unusually hot, dry summers and mild winters in 2004 C2007 throughout the United States and Canada, along with forests filled with mature lodgepole pine, led to an unprecedented epidemic. The outbreak may have been the largest forest insect blight seen in North America since European colonization. Monocultural replanting, and a century of forest fire suppression have contributed to the size and severity of the outbreak, and the outbreak itself may, with similar infestations, have significant effects on the capability of northern forests to remove greenhouse gases (such as CO2) from the atmosphere. Because of its impact on forestry, the transcriptome and the genome of the beetle have been sequenced. It was the second beetle genome to be sequenced.
from Wikipedia
Taxonomic Information
Eukaryota
Arthropoda
Insecta
Coleoptera
Curculionidae
Dendroctonus
ponderosae
nan
Species
nan
k__Eukaryota;p__Arthropoda;c__Insecta;o__Coleoptera;f__Curculionidae;g__Dendroctonus;s__Dendroctonus ponderosae
nan
Arthropods
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (19 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Picea engelmannii | Host |
| Pinus | Host |
| Pinus albicaulis | Host |
| Pinus aristata | Host |
| Pinus balfouriana | Host |
| Pinus banksiana | Host |
| Pinus contorta | Host |
| Pinus contorta var. latifolia | Host |
| Pinus coulteri | Host |
| Pinus edulis | Host |
Quarantine Status (15 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Armenia | Absent | — |
| Belarus | Absent | — |
| Cuba | Absent | — |
| EPPO A1 | Absent | — |
| Greece | Quarantine pests | — |
| Croatia | Quarantine pests | — |
| Japan | Quarantine pests | — |
| Kazakhstan | A1 list | 2017 |
| Republic of Korea | Quarantine pests | — |
| Sri Lanka | Quarantine pests | — |
Distribution (5 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Absent | — |
| Canada | Present | |
| Germany | Present | — |
| Mexico | Present | — |
| United States of America | Present |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_000355655.1 | Scaffold | 252 | 7 | 628 | - |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR12682693 | Full body | Adult | female | 69685842 | Canada: Grande Prairie area | |
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PRJNA664756 SRX9162750 SRP284250 insect RNA-seq data for Dendroctonus ponderosae: collected near Grande Prairie, Alberta, Canada RNA extraction with direct-zol RNA Miniprep kit; library prep done with TruSeq stranded RNA LT kit {'sex': 'female', 'host': 'Pinus contorta', 'tissue': 'Full body', 'dev_stage': 'Adult', 'replicate': 'SF4', 'collected_by': 'Victor Shegelski', 'geo_loc_name': 'Canada: Grande Prairie area', 'biosamplemodel': 'Invertebrate', 'collection_date': '2015'} |
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| SRR12682692 | Full body | Adult | female | 45755525 | Canada: Grande Prairie area | |
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PRJNA664756 SRX9162751 SRP284250 insect RNA-seq data for Dendroctonus ponderosae: collected near Grande Prairie, Alberta, Canada RNA extraction with direct-zol RNA Miniprep kit; library prep done with TruSeq stranded RNA LT kit {'sex': 'female', 'host': 'Pinus contorta', 'tissue': 'Full body', 'dev_stage': 'Adult', 'replicate': 'SF5', 'collected_by': 'Victor Shegelski', 'geo_loc_name': 'Canada: Grande Prairie area', 'biosamplemodel': 'Invertebrate', 'collection_date': '2015'} |
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| SRR12682691 | Full body | Adult | female | 25126794 | Canada: Grande Prairie area | |
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PRJNA664756 SRX9162752 SRP284250 insect RNA-seq data for Dendroctonus ponderosae: collected near Grande Prairie, Alberta, Canada RNA extraction with direct-zol RNA Miniprep kit; library prep done with TruSeq stranded RNA LT kit {'sex': 'female', 'host': 'Pinus contorta', 'tissue': 'Full body', 'dev_stage': 'Adult', 'replicate': 'SF6', 'collected_by': 'Victor Shegelski', 'geo_loc_name': 'Canada: Grande Prairie area', 'biosamplemodel': 'Invertebrate', 'collection_date': '2015'} |
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DNA Barcodes (119 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| GBMNA46791-19 | - | COI-3P | 770 | - | - | - | |
| GBMNA46790-19 | - | COI-3P | 762 | - | - | - | |
| GBMNA46789-19 | - | COI-3P | 769 | - | - | - | |
| GBMNA46788-19 | - | COI-3P | 761 | - | - | - | |
| GBMIN28941-13 | - | COI-5P | 1181 | - | - | - | |
| GBMIN28940-13 | - | COI-5P | 1181 | - | - | - | |
| GBMIN28939-13 | - | COI-5P | 1181 | - | - | - | |
| GBMIN28938-13 | - | COI-5P | 1181 | - | - | - | |
| GBMIN28937-13 | - | COI-5P | 1181 | - | - | - | |
| GBMIN28936-13 | - | COI-5P | 1181 | - | - | - |
Literature
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