Oryza rufipogon

TaxID: 4529

Basic Information

Oryza rufipogon

Brownbeard Rice, brownbeard rice

Oryza rufipogon is a species of flowering plant in the family Poaceae. It is known as brownbeard rice, wild rice, and red rice. In 1965, Oryza nivara was separated off from O. rufipogon. The separation has been questioned, and now many sources consider O. nivara to be a synonym of O. rufipogon. O. nivara may be treated as the annual form of O. rufipogon. It is native to East-, Southeast- and South- Asia. It has a close evolutionary relation to Oryza sativa, the plant grown as a major rice food crop throughout the world. Oryza nivara is a possible wild progenitor of cultivated rice. Both have an AA genome.

from Wikipedia

Taxonomic Information

Eukaryota

Streptophyta

Magnoliopsida

Poales

Poaceae

Oryza

rufipogon

Unclassified

Photos (5 photos)

Oryza rufipogon
c
(c) SONU KUMAR@BY-NC
Oryza rufipogon
c
(c) 江国彬@BY-NC
Oryza rufipogon
c
(c) Btcpg@BY-SA
Oryza rufipogon
c
(c) 江国彬@BY-NC
Oryza rufipogon
c
(c) MBG@BY-NC-SA

Morphological Features

No morphological description available.

Host Plants (0 host plants)

Data sources: EPPO Global Database and relevant literature.

No host plants available.

Quarantine Status (4 records)

Data sources: IPPC website and national quarantine websites; verified by human review.

Country Status Year Added
Cuba Absent —
Mexico Quarantine pests 2018
Nicaragua Absent —
United States of America Quarantine pests 1989

Distribution (34 countries)

Data Sources: EPPO Global Database and GBIF.

34
Present
0
Absent
0
Unknown/Other
Country Status State
Argentina Present —
Australia Present —
Bangladesh Present —
Belize Present —
Bolivia (Plurinational State of) Present —
Brazil Present —
Cambodia Present —
China Present —
Colombia Present —
Costa Rica Present —
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Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

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Genomes (1 records)

Data source: NCBI.

Assembly Accession Assembly Level Genome Size(Mb) Contig N50(Kb) Scaffold N50(Kb) BUSCO% Downloads Actions
GCA_000700045.1 Chromosome 12 8 12740 -

Transcriptomes (3 records)

Data source: NCBI.

Run ID Tissue Developmental Stage Sex Read Count Location Actions
SRR37535953 leaf - - 53457286 missing
SRR37535952 leaf - - 48583186 missing
SRR37535951 leaf - - 44851962 missing

DNA Barcodes (111 records)

View all

Data source: BOLD.

Process ID BIN Marker Length Country Date Lat/Lon Sequence
JRPAA4111-15 - COI-5P 1572 - - -
JRPAA4110-15 - COI-5P 1572 - - -
ITSAD4733-14 - ITS2 229 Australia - -25.697338, 134.02277
ITSAD4729-14 - ITS2 229 Colombia - 4.1877537, -72.64451
ITSAD4728-14 - ITS2 229 China - 38.073254, 104.69114
ITSAD4727-14 - ITS2 229 Thailand - 13.662228, 101.086754
GBVX7407-15 - matK 1417 India 2012-08-11 23.5863, 81.173004
GBVX2718-15 - rbcL 1309 India - 23.5863, 81.173004
GBVX2717-15 - rbcL 1309 Myanmar - 19.901228, 97.08892
GBVX2716-15 - rbcL 1309 India - 23.5863, 81.173004
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Literature