Bipolaris sorokiniana
TaxID: 45130
Basic Information
Bipolaris sorokiniana
Foot Rot of Cereals, bipolaris
The fungus Cochliobolus sativus is the teleomorph (sexual stage) of Bipolaris sorokiniana (anamorph) which is the causal agent of a wide variety of cereal diseases. The pathogen can infect and cause disease on roots (where it is known as common root rot), leaf and stem, and head tissue. C. sativus is extremely rare in nature and thus it is the asexual or anamorphic stage which causes infections. The two most common diseases caused by B. sorokiniana are spot blotch and common root rot, mainly on wheat and barley crops.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Dothideomycetes
Pleosporales
Pleosporaceae
Bipolaris
sorokiniana
Undefined
Species
nan
d__Eukaryota;p__Ascomycota;c__Dothideomycetes;o__Pleosporales;f__Pleosporaceae;g__Bipolaris;s__Bipolaris sorokiniana
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (26 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Argentina | Present | — |
| Australia | Present | — |
| Brazil | Present | — |
| Canada | Present | — |
| China | Present | — |
| Spain | Present | — |
| France | Present | — |
| United Kingdom | Present | — |
| Greece | Present | — |
| India | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_004329375.1 | Contig | 37 | 2114 | 2114 | - |
|
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ASM432937v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR19647709 | - | - | - | 29812262 | China:Henan province | |
|
PRJNA847724 SRX15697603 SRP380149 fungi RNA-seq of Bipolaris sorokiniana normal RNA-seq of Bipolaris sorokiniana LK-93 {'host': 'wheat', 'strain': 'LK-93', 'replicate': 'replicate = biological replicate 4', 'sample_type': 'mycelium', 'geo_loc_name': 'China:Henan province', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2020-09-20', 'isolation_source': 'wheat field'} |
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| SRR19647708 | - | - | - | 29103576 | China:Henan province | |
|
PRJNA847724 SRX15697604 SRP380149 fungi RNA-seq of Bipolaris sorokiniana normal RNA-seq of Bipolaris sorokiniana LK-93 {'host': 'wheat', 'strain': 'LK-93', 'replicate': 'replicate = biological replicate 5', 'sample_type': 'mycelium', 'geo_loc_name': 'China:Henan province', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2020-09-20', 'isolation_source': 'wheat field'} |
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| SRR19647707 | - | - | - | 29672204 | China:Henan province | |
|
PRJNA847724 SRX15697605 SRP380149 fungi RNA-seq of Bipolaris sorokiniana normal RNA-seq of Bipolaris sorokiniana LK-93 {'host': 'wheat', 'strain': 'LK-93', 'replicate': 'replicate = biological replicate 6', 'sample_type': 'mycelium', 'geo_loc_name': 'China:Henan province', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2020-09-20', 'isolation_source': 'wheat field'} |
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Literature
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