Ustilaginoidea virens
TaxID: 1159556
Basic Information
Ustilaginoidea virens
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Ustilaginoidea virens, perfect sexual stage Villosiclava virens, is a plant pathogen which causes the disease "false smut" of rice which reduces both grain yield and grain quality. The disease occurs in more than 40 countries, especially in the rice producing countries of Asia. but also in the U.S. As the common name suggests, it is not a true smut (fungus), but an ascomycete. False smut does not replace all or part of the kernel with a mass of black spores, rather sori form erupting through the palea and lemma forming a ball of mycelia, the outermost layers are spore-producing. Infected rice kernels are always destroyed by the disease. Of particular concern are the production of alkaloids in the grain as with the Claviceps spp. causing ergot however U. virens is not a Claviceps/ergot fungus, is not known to produce ergotism, and lacks enzymes necessary in ergot synthesis. Although U. virens does infect maize/corn, it does not do so often, produce significant disease, or have economic consequences.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Hypocreales
Clavicipitaceae
Ustilaginoidea
Ustilaginoidea virens
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Species
k__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Hypocreales;f__Clavicipitaceae;g__Ustilaginoidea;s__Ustilaginoidea virens
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_000687475.1 | Complete Genome | 37 | 6429 | 6429 | - |
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ASM68747v2 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR30760093 | - | - | - | 27473195 | China: Zhejiang | |
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PRJNA1163272 SRX26162648 SRP534044 fungi RNA-seq of Ustilaginoidea virens: UvCYP503 mutant-1 mutant-1 JS60-2 {'host': 'Rice', 'strain': 'JS60-2', 'sample_type': 'Fungi', 'geo_loc_name': 'China: Zhejiang', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2022-07'} |
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| SRR30760092 | - | - | - | 23041922 | China: Zhejiang | |
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PRJNA1163272 SRX26162649 SRP534044 fungi RNA-seq of Ustilaginoidea virens: UvCYP503 mutant-2 mutant-2 JS60-2 {'host': 'Rice', 'strain': 'JS60-2', 'sample_type': 'Fungi', 'geo_loc_name': 'China: Zhejiang', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2022-07'} |
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| SRR30760091 | - | - | - | 23400627 | China: Zhejiang | |
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PRJNA1163272 SRX26162650 SRP534044 fungi RNA-seq of Ustilaginoidea virens: UvCYP503 mutant-3 mutant-3 JS60-2 {'host': 'Rice', 'strain': 'JS60-2', 'sample_type': 'Fungi', 'geo_loc_name': 'China: Zhejiang', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2022-07'} |
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Literature
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