Alternaria alternata
TaxID: 5599
Basic Information
Alternaria alternata
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Alternaria alternata is a fungus causing leaf spots, rots, and blights on many plant parts, and other diseases. It is an opportunistic pathogen on over 380 host species of plant. It can also cause upper respiratory tract infections and asthma in humans with compromised immunity.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Dothideomycetes
Pleosporales
Pleosporaceae
Alternaria
Alternaria alternata
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Species
k__Eukaryota;p__Ascomycota;c__Dothideomycetes;o__Pleosporales;f__Pleosporaceae;g__Alternaria;s__Alternaria alternata
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (10 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Angola | Quarantine pests | — |
| Cambodia | Quarantine pests | — |
| North Macedonia | Absent | — |
| Malta | Unknow | — |
| Myanmar | Quarantine pests | — |
| Malaysia | Quarantine pests | — |
| French Polynesia | Quarantine pests | — |
| Sudan | Quarantine pests | — |
| Sao Tome and Principe | Quarantine pests | — |
| United States of America | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_001642055.1 | Scaffold | 32 | 1097 | 1097 | - |
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Altal1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR37095537 | - | - | - | 19581300 | China: Zhengzhou | |
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PRJNA1418341 SRX32041917 SRP674305 fungi RNA-Seq of Alternaria alternata:C-Rep1 Total RNA was extracted from Alternaria alternata mycelium; mRNA was enriched using oligo(dT) primers, then converted to double-stranded cDNA for paired-end library construction C-1 {'host': 'Fragaria x ananassa', 'strain': 'ZS-1', 'isolate': 'C-1', 'sample_type': 'mycelium', 'geo_loc_name': 'China: Zhengzhou', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2025-06-24', 'isolation_source': 'strawberry', 'biological replicate': '1'} |
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| SRR37095536 | - | - | - | 23233455 | China: Zhengzhou | |
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PRJNA1418341 SRX32041918 SRP674305 fungi RNA-Seq of Alternaria alternata:C-Rep2 Total RNA was extracted from Alternaria alternata mycelium; mRNA was enriched using oligo(dT) primers, then converted to double-stranded cDNA for paired-end library construction C-2 {'host': 'Fragaria x ananassa', 'strain': 'ZS-1', 'isolate': 'C-2', 'sample_type': 'mycelium', 'geo_loc_name': 'China: Zhengzhou', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2025-06-24', 'isolation_source': 'strawberry', 'biological replicate': '2'} |
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| SRR37095535 | - | - | - | 23631719 | China: Zhengzhou | |
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PRJNA1418341 SRX32041919 SRP674305 fungi RNA-Seq of Alternaria alternata:C-Rep3 Total RNA was extracted from Alternaria alternata mycelium; mRNA was enriched using oligo(dT) primers, then converted to double-stranded cDNA for paired-end library construction C-3 {'host': 'Fragaria x ananassa', 'strain': 'ZS-1', 'isolate': 'C-3', 'sample_type': 'mycelium', 'geo_loc_name': 'China: Zhengzhou', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2025-06-24', 'isolation_source': 'strawberry', 'biological replicate': '3'} |
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DNA Barcodes (6 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| GBPLE1222-13 | - | ITS | 528 | - | - | - | |
| GBPLE1215-13 | - | ITS | 527 | - | - | - | |
| GBPLE1211-13 | - | ITS | 534 | - | - | - | |
| GBPLE1182-13 | - | ITS | 526 | - | - | - | |
| GBPLE035-13 | - | ITS | 594 | - | - | - | |
| GBPLE012-13 | - | ITS | 526 | - | - | - |
Literature
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