Septoria pistaciarum

Illumina RNAseq of Septoria pistaciarum:IV-R1

Fungal mRNA was extracted in triplicate from the mycelial phase of isolate SPF8 on PDA medium from a fresh two-weeks-old culture. Samples were prepared with the Quick-RNA Fungal/Bacterial Miniprep kit (Zymo Research) and Novogene NGS RNA Library Prep Set (PT042), from which Illumina RNAseq reads were generated (PE150 Novaseq 6000).

{'host': 'Pistacia vera L.', 'isolate': 'SPF8', 'lat_lon': '38.629963 N 22.681427 E', 'env_medium': 'leaf [PO:0025034]', 'host_taxid': '55513', 'host_height': '~10m', 'geo_loc_name': 'Greece: Amfikleia, Fthiotida', 'host_disease': 'Septoria leaf spot disease', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.plant-associated', 'host_phenotype': 'susceptible', 'collection_date': '2023', 'env_broad_scale': 'cropland biome [ENVO_01000245]', 'env_local_scale': 'orchard [ENVO:00000115]', 'host_common_name': 'Pistachio', 'isol_growth_condt': 'Mycelial phase grown on PDA medium from a fresh two-week-old culture. Replicate 1 of 3.'}

Illumina RNAseq of Septoria pistaciarum:IV-R2

Fungal mRNA was extracted in triplicate from the mycelial phase of isolate SPF8 on PDA medium from a fresh two-weeks-old culture. Samples were prepared with the Quick-RNA Fungal/Bacterial Miniprep kit (Zymo Research) and Novogene NGS RNA Library Prep Set (PT042), from which Illumina RNAseq reads were generated (PE150 Novaseq 6000).

{'host': 'Pistacia vera L.', 'isolate': 'SPF8', 'lat_lon': '38.629963 N 22.681427 E', 'env_medium': 'leaf [PO:0025034]', 'host_taxid': '55513', 'host_height': '~10m', 'geo_loc_name': 'Greece: Amfikleia, Fthiotida', 'host_disease': 'Septoria leaf spot disease', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.plant-associated', 'host_phenotype': 'susceptible', 'collection_date': '2023', 'env_broad_scale': 'cropland biome [ENVO_01000245]', 'env_local_scale': 'orchard [ENVO:00000115]', 'host_common_name': 'Pistachio', 'isol_growth_condt': 'Mycelial phase grown on PDA medium from a fresh two-week-old culture. Replicate 2 of 3.'}

Illumina RNAseq of Septoria pistaciarum:IV-R3

Fungal mRNA was extracted in triplicate from the mycelial phase of isolate SPF8 on PDA medium from a fresh two-weeks-old culture. Samples were prepared with the Quick-RNA Fungal/Bacterial Miniprep kit (Zymo Research) and Novogene NGS RNA Library Prep Set (PT042), from which Illumina RNAseq reads were generated (PE150 Novaseq 6000).

{'host': 'Pistacia vera L.', 'isolate': 'SPF8', 'lat_lon': '38.629963 N 22.681427 E', 'env_medium': 'leaf [PO:0025034]', 'host_taxid': '55513', 'host_height': '~10m', 'geo_loc_name': 'Greece: Amfikleia, Fthiotida', 'host_disease': 'Septoria leaf spot disease', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.plant-associated', 'host_phenotype': 'susceptible', 'collection_date': '2023', 'env_broad_scale': 'cropland biome [ENVO_01000245]', 'env_local_scale': 'orchard [ENVO:00000115]', 'host_common_name': 'Pistachio', 'isol_growth_condt': 'Mycelial phase grown on PDA medium from a fresh two-week-old culture. Replicate 3 of 3.'}