Fusarium oxysporum f. sp. radicis-lycopersici
TaxID: 61372
Basic Information
Fusarium oxysporum f. sp. radicis-lycopersici
Fusarium Wilt
Fusarium oxysporum f.sp. radicis-lycopersici is a fungal plant pathogen.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Hypocreales
Nectriaceae
Fusarium
oxysporum
f. sp. radicis-lycopersici
Under_Species
nan
d__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Hypocreales;f__Nectriaceae;g__Fusarium;s__Fusarium oxysporum
nan
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Peru | Absent | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_048165035.1 | Complete Genome | 53 | 4883 | 4883 | - |
|
|
|
ASM4816503v1 |
|||||||
Transcriptomes (6 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR22799079 | - | - | - | 21351335 | China: Qingdao | |
|
PRJNA913446 SRX18758832 SRP413579 fungi RNA-seq of Forl, linalool-treated replicate 1 linalool-treated replicate 1 not collected {'host': 'tomato', 'strain': 'not collected', 'replicate': 'biological replicate 4', 'sample_type': 'mycelia', 'geo_loc_name': 'China: Qingdao', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2021-10-23', 'forma_specialis': 'radicis-lycopersici'} |
||||||
| SRR22799078 | - | - | - | 22197181 | China: Qingdao | |
|
PRJNA913446 SRX18758833 SRP413579 fungi RNA-seq of Forl, linalool-treated replicate 2 linalool-treated replicate 2 not collected {'host': 'tomato', 'strain': 'not collected', 'replicate': 'biological replicate 5', 'sample_type': 'mycelia', 'geo_loc_name': 'China: Qingdao', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2021-10-23', 'forma_specialis': 'radicis-lycopersici'} |
||||||
| SRR22799077 | - | - | - | 22716347 | China: Qingdao | |
|
PRJNA913446 SRX18758834 SRP413579 fungi RNA-seq of Forl, linalool-treated replicate 3 linalool-treated replicate 3 not collected {'host': 'tomato', 'strain': 'not collected', 'replicate': 'biological replicate 6', 'sample_type': 'mycelia', 'geo_loc_name': 'China: Qingdao', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2021-10-23', 'forma_specialis': 'radicis-lycopersici'} |
||||||
| SRR22799082 | - | - | - | 22391338 | - | |
|
PRJNA913446 SRX18758829 SRP413579 RNA-seq of Forl, control replicate 1 control replicate 1 not collected {'host': 'tomato', 'strain': 'not collected', 'replicate': 'biological replicate 1', 'sample_type': 'mycelia', 'geo_loc_name': 'China: Qingdao', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2021-10-23', 'forma_specialis': 'radicis-lycopersici'} |
||||||
| SRR22799081 | - | - | - | 22028320 | - | |
|
PRJNA913446 SRX18758830 SRP413579 RNA-seq of Forl, control replicate 2 control replicate 2 not collected {'host': 'tomato', 'strain': 'not collected', 'replicate': 'biological replicate 2', 'sample_type': 'mycelia', 'geo_loc_name': 'China: Qingdao', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2021-10-23', 'forma_specialis': 'radicis-lycopersici'} |
||||||
| SRR22799080 | - | - | - | 21000413 | - | |
|
PRJNA913446 SRX18758831 SRP413579 RNA-seq of Forl, control replicate 3 control replicate 3 not collected {'host': 'tomato', 'strain': 'not collected', 'replicate': 'biological replicate 3', 'sample_type': 'mycelia', 'geo_loc_name': 'China: Qingdao', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2021-10-23', 'forma_specialis': 'radicis-lycopersici'} |
||||||
Literature
Fetching literature from NCBI PubMed...
Failed to fetch literature