Microstegium vimineum

TaxID: 91518

Basic Information

Scientific Name *

Common Name

Chinese Packing Grass, Japanese Stiltgrass, Japanese stiltgrass

Introduction

Microstegium vimineum, commonly known as Japanese stiltgrass, packing grass, or Nepalese browntop, is an annual grass that is common in a wide variety of habitats and is well adapted to low light levels. It has become an invasive species throughout parts of the world, most notably North America.

from Wikipedia

Taxonomic Information

Domain/Kingdom

Eukaryota

Phylum

Streptophyta

Class

Magnoliopsida

Order

Poales

Family

Poaceae

Genus

Microstegium

Species

vimineum

Subspecies

Unclassified

Photos (5 photos)

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Morphological Features

No morphological description available.

Host Plants (0 host plants)

Data sources: EPPO Global Database and relevant literature.

No host plants available.

Quarantine Status (31 records)

Data sources: IPPC website and national quarantine websites; verified by human review.

Country	Status	Year Added
Austria	IAS of Union concern	2017
Belgium	IAS of Union concern	2017
Bulgaria	IAS of Union concern	2017
Canada	Quarantine pests	2019
Cyprus	IAS of Union concern	2017
Czechia	IAS of Union concern	2017
Germany	IAS of Union concern	2017
Denmark	IAS of Union concern	2017
EPPO A2	Present	—
Spain	IAS of Union concern	2017

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Distribution (25 countries)

Data Sources: EPPO Global Database and GBIF.

23

Present

1

Absent

0

Unknown/Other

Country	Status	State
Azerbaijan	Present	—
Belgium	Present	—
Bhutan	Present	—
Canada	Transient
China	Present
Cameroon	Present	—
Democratic Republic of the Congo	Absent	—
Costa Rica	Present	—
Georgia	Present	—
Hong Kong, China	Present	—

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Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

Download CSV

Genomes (1 records)

Data source: NCBI.

Assembly Accession	Assembly Level	Genome Size(Mb)	Contig N50(Kb)	Scaffold N50(Kb)	BUSCO%	Downloads	Actions
GCA_022036555.1	Chromosome	1118	597	53044	-	FASTA
Assembly Name ASM2203655v1

Transcriptomes (6 records)

Data source: NCBI.

Run ID	Tissue	Developmental Stage	Sex	Read Count	Location	Actions
SRR16219867	leaf	-	-	22767749	-	Download NCBI
BioProject PRJNA769079 Experiment ID SRX12501806 Study ID SRP340269 Category weed Title RNAseq for M.vimineum Design Description Total RNAs were extracted using the QIAGEN RNeasy Plus Kit following manufacturer protocols. Total RNAs were quantified using the Qubit RNA Assay and a TapeStation 4200. Sample Attributes {'tissue': 'leaf', 'biosamplemodel': 'Plant', 'sample attribute': 'leaf-biorep1-R1', 'geographic location': 'USA: West Virginia'}
SRR16219866	leaf	-	-	22224165	-	Download NCBI
BioProject PRJNA769079 Experiment ID SRX12501807 Study ID SRP340269 Category weed Title RNAseq for M.vimineum Design Description Total RNAs were extracted using the QIAGEN RNeasy Plus Kit following manufacturer protocols. Total RNAs were quantified using the Qubit RNA Assay and a TapeStation 4200. Sample Attributes {'tissue': 'leaf', 'biosamplemodel': 'Plant', 'sample attribute': 'leaf-biorep2-R1', 'geographic location': 'USA: West Virginia'}
SRR16219865	leaf	-	-	25676198	-	Download NCBI
BioProject PRJNA769079 Experiment ID SRX12501808 Study ID SRP340269 Category weed Title RNAseq for M.vimineum Design Description Total RNAs were extracted using the QIAGEN RNeasy Plus Kit following manufacturer protocols. Total RNAs were quantified using the Qubit RNA Assay and a TapeStation 4200. Sample Attributes {'tissue': 'leaf', 'biosamplemodel': 'Plant', 'sample attribute': 'leaf-biorep3-R1', 'geographic location': 'USA: West Virginia'}
SRR16219862	chasmogamous-inflorescence	-	-	26324968	-	Download NCBI
BioProject PRJNA769079 Experiment ID SRX12501810 Study ID SRP340269 Category general Title RNAseq for M.vimineum Design Description Total RNAs were extracted using the QIAGEN RNeasy Plus Kit following manufacturer protocols. Total RNAs were quantified using the Qubit RNA Assay and a TapeStation 4200. Sample Attributes {'tissue': 'chasmogamous-inflorescence', 'biosamplemodel': 'Plant', 'sample attribute': 'chasm-inf-biorep2-R1', 'geographic location': 'USA: West Virginia'}
SRR16219860	chasmogamous-inflorescence	-	-	30556540	-	Download NCBI
BioProject PRJNA769079 Experiment ID SRX12501811 Study ID SRP340269 Category general Title RNAseq for M.vimineum Design Description Total RNAs were extracted using the QIAGEN RNeasy Plus Kit following manufacturer protocols. Total RNAs were quantified using the Qubit RNA Assay and a TapeStation 4200. Sample Attributes {'tissue': 'chasmogamous-inflorescence', 'biosamplemodel': 'Plant', 'sample attribute': 'chasm-inf-biorep3-R1', 'geographic location': 'USA: West Virginia'}
SRR16219858	cleistogamous-inflorescence	-	-	24518683	-	Download NCBI
BioProject PRJNA769079 Experiment ID SRX12501812 Study ID SRP340269 Category general Title RNAseq for M.vimineum Design Description Total RNAs were extracted using the QIAGEN RNeasy Plus Kit following manufacturer protocols. Total RNAs were quantified using the Qubit RNA Assay and a TapeStation 4200. Sample Attributes {'tissue': 'cleistogamous-inflorescence', 'biosamplemodel': 'Plant', 'sample attribute': 'cleisto-inf-biorep1-R1', 'geographic location': 'USA: West Virginia'}

DNA Barcodes (52 records)

View all

Data source: BOLD.

Process ID	BIN	Marker	Length	Country	Date	Lat/Lon	Sequence
SERC142-14	-	trnH-psbA	618	United States	2012-08-08	38.89, -76.55	ACAACTTCCCTCTAGACCTAGCTGCTCTTGAAGTTCCATCTCTTAATGGATAA--GG------------------------------T----------T--------------------------------------TTT------------------------CTCCTAA-------------------------ACAT-A-TAG---------------GA----------A---------------------------------------------------------------------------------------------------------------------T-----------------------T----------TTTG-------------------------------------AA---GGAAGGA--------------------------------AA-------------------------GCCGGAA---------AT------------------------------ACCCAAT------------A--------------------------------------------------------------------------------------------------------------------------------TCTTG--TTCCAACAGGAT-----------ATTGGGTATTTCTTTGTTTATTCTGAATC-----T-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--------AT-TCTGAATTCAATTAACGACGA------------------------------GA-----------TTTAGTA---------TC---------CTTTCTTGTACTTTCATAACTCGTGAAATGCCGAGTAGGCACGAATTCCCCCAATTTGCGACCCACCATAGGAT---T---T-----GTTAT--------------------------------------------------------------------------GTAAATAGGTATA---------TGTTCTTTT----CCATTATGAATCGCGATTGTATGGCCAACCATTGCGGGTAGAATGCTAGATGCCCGGG-----------ACCA------CGTTACTATTATTTCTT----------------------------------------------------------------------------------------------------TCTCCTCCTTCATA------------TTG-------------------ACCTTTTCG---ATTTTT----------------------------------------------------------------------------------------------------------------------------------------------GCCAATAAATGACGAGCTACAAA------------------------------------------------------------AGGATTCGTTTTTTTTCGTGTCACAGCTGATTACTCC--------TTTT--------TTTCATTTTA--------------AAGAGTGGCATCCTA----------TGTCCACTAT----------------------------------------------------------------------------------------------------CTCGATCGAGGTATGGAGGTCAGGATAAATAG--AATAATA-------ATGAATG--------GA---AA-------AAA------------------GAGAAAATCCTTTAGCTGGAT-------------------------------------------------------------------------------------------------------------------------------------AAGG-GGCGGATGTAGCCAAGTGGATCAAGGCAGT
SERC142-14	-	rbcLa	553	United States	2012-08-08	38.89, -76.55	AAGTGTTGGATTCAAAGCTGGTGTTAAGGATTATAAATTGACTTACTACACCCCGGAGTACGAAACCAAGGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAGCTCGGGGTTCCGCCTGAAGAAGCAGGAGCTGCAGTAGCTGCGGAATCTTCTACTGGTACATGGACAACTGTTTGGACTGATGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTATCACATCGAGCCCGTTCCTGGGGACCCAGATCAATATATCTGTTATGTAGCTTATCCATTAGACCTATTTGAAGAGGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAACGTATTTGGTTTCAAAGCCTTACGTGCTCTACGTTTGGAGGATCTACGAATTCCCCCTGCTTATGCAAAAACTTTCCAAGGTCCGCCTCACGGTATCCAAGTTGAAAGGGATAAGTTGAACAAGTACGGTCGTCCTTTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCCAAAAATTACGGTAGAGCGTGTTATGAGTGTCTA
SCBI403-14	-	trnH-psbA	618	United States	2013-09-30	38.892, -78.146	ACAACTTCCCTCTAGACCTAGCTGCTCTTGAAGTTCCATCTCTTAATGGATAA--GG------------------------------T----------T--------------------------------------TTT------------------------CTCCTAA-------------------------ACAT-A-TAG---------------GA----------A---------------------------------------------------------------------------------------------------------------------T-----------------------T----------TTTG-------------------------------------AA---GGAAGGA--------------------------------AA-------------------------GCCGGAA---------AT------------------------------ACCCAAT------------A--------------------------------------------------------------------------------------------------------------------------------TCTTG--TTCCAACAGGAT-----------ATTGGGTATTTCTTTGTTTATTCTGAATC-----T-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--------AT-TCTGAATTCAATTAACGACGA------------------------------GA-----------TTTAGTA---------TC---------CTTTCTTGTACTTTCATAACTCGTGAAATGCCGAGTAGGCACGAATTCCCCCAATTTGCGACCCACCATAGGAT---T---T-----GTTAT--------------------------------------------------------------------------GTAAATAGGTATA---------TGTTCTTTT----CCATTATGAATCGCGATTGTATGGCCAACCATTGCGGGTAGAATGCTAGATGCCCGGG-----------ACCA------CGTTACTATTATTTCTT----------------------------------------------------------------------------------------------------TCTCCTCCTTCATA------------TTG-------------------ACCTTTTCG---ATTTTT----------------------------------------------------------------------------------------------------------------------------------------------GCCAATAAATGACGAGCTACAAA------------------------------------------------------------AGGATTCGTTTTTTTTCGTGTCACAGCTGATTACTCC--------TTTT--------TTTCATTTTA--------------AAGAGTGGCATCCTA----------TGTCCACTAT----------------------------------------------------------------------------------------------------CTCGATCGAGGTATGGAGGTCAGGATAAATAG--AATAATA-------ATGAATG--------GA---AA-------AAA------------------GAGAAAATCCTTTAGCTGGAT-------------------------------------------------------------------------------------------------------------------------------------AAGG-GGCGGATGTAGCCAAGTGGATCAAGGCAGT
SCBI403-14	-	rbcLa	553	United States	2013-09-30	38.892, -78.146	AAGTGTTGGATTTAAAGCTGGTGTTAAGGATTATAAATTGACTTACTACACCCCGGAGTACGAAACCAAGGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAGCTCGGGGTTCCGCCTGAAGAAGCAGGAGCTGCAGTAGCTGCGGAATCTTCTACTGGTACATGGACAACTGTTTGGACTGATGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTATCACATCGAGCCCGTTCCTGGGGACCCAGATCAATATATCTGTTATGTAGCTTATCCATTAGACCTATTTGAAGAGGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAACGTATTTGGTTTCAAAGCCTTACGTGCTCTACGTTTGGAGGATCTACGAATTCCCCCTGCTTATGCAAAAACTTTCCAAGGTCCGCCTCACGGTATCCAAGTTGAAAGGGATAAGTTGAACAAGTACGGTCGTCCTTTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCAAAAAATTACGGTAGAGCGTGTTATGAGTGTCTA
SCBI403-14	-	matK	757	United States	2013-09-30	38.892, -78.146	GTTCCCTCTTTGCATTTATTGCGATTCTTTCTCCACTATTATTCGAATTGGAAT------AGTCTTATTACTTCAATGAAATCCATTTTTCTT---TTGAAAAAAGAA------------------------------AATAAAAGACTATTTCGATTCCTATATAACTCTTATGTATCAGAATATGAATTTTTCTTGTTGTTTCTTCGTAAACAATCTTCTTGCTTACGATTAACATCTTCTGGAACCTTTCTGGAACGAATCATCTTTTCTGGGAAGATGGAA------------------CATTTTGGTGTA---------------------ATGTACCCGGGGTTTTTTCGGAAAACCATA------TGGTTCTTTATGGATCCTCTTATGCATTATGTTCGATATCAAGGAAAGGCAATTCTTGCATCAAAAGGCACTCTTCTTTTGAAGAAG---AAATGGAAATCTTACTTTGTCAATTTCTCGCAATATTTTTTCTCTTTTTGGACTCAACCA------CAAAGGATTCGTCTA------AACCAATTAACAAACTCTTGCTTCGATTTTCTGGGGTACCTTTCAAGTGTACCAATAAATACTTTG---TTAGTAAGGAATCAAATGCTG------GAGAATTCTTTTCTAATAGATACTCGAATG------AAAAAATTCGATACCACAGTCCCTGCAACTCCCCTCGTTGGATCCTTATCAAAAGCTCAATTTTGTACTGGATCGGGGCATCCTATTAGT---AAACCCGTTTGGACTGATTTATCAGATTGGGATATTCTTGATCGTTTTGGTCGGATATGTAGAAATCTTTTTCATTATCATAGTGGATCCTCGAAAAAAC---
ITSAP957-14	-	ITS2	224	South Korea	-	36.402386, 127.762245	CAAAAGACACTCCCAACCCACCCTCGGGTAGGGACGTGGCGTCTGGCCCCTCGCGCCGCAGGGCGCGGTGGGCCGAAGTTGGGGCTGCCGGCGAATCGTGTCGGGCACAGCACGTGGTGGGCGACACCTAGTGTTCCTCGGTGCAGCGCCCCGGCACGCGGCCGGCGTCGGCCCTAAGGACCCATCGAGCACCGCAGCGCACAGCCGCTCGGACCGCGACCCCA
ITSAP954-14	-	ITS2	224	South Korea	-	36.402386, 127.762245	CAAAAGACACTCCCAACCCACCCTCGGGTAGGGACGTGGCGTCTGGCCCCTCGCGCCGCAGGGCGCGGTGGGCCGAAGTTGGGGCTGCCGGCGAATCGTGTCGGGCACAGCACGTGGTGGGCGACACCTAGTGTTCCTCGGTGCAGCGCCCCGGCACGCGGCCGGCGTCGGCCCTAAGGACCCATCGAGCACCGCAGCGCACAGCCGCTCGGACCGCGACCCCA
ITSAP896-14	-	ITS2	224	South Korea	-	36.402386, 127.762245	CAAAAGACACTCCCAACCCACCCTCGGGTAGGGACGTGGCGTCTGGCCCCTCGCGCCGCAGGGCGCGGTGGGCCGAAGTTGGGGCTGCCGGCGAATCGTGTCGGGCACAGCACGTGGTGGGCGACACCTAGTGTTCCTCGGTGCAGCGCCCCGGCACGCGGCCGGCGTCGGCCCTAAGGACCCATCGAGCACCGCAGCGCACAGCCGCTCGGACCGCGACCCCA
IPSUB663-18	-	trnH-psbA	614	Japan	-	36.767387, 137.46935	ACAACTTCCCTCTAGACCTAGCTGCTCTTGAAGTTCCATCTCTTAATGGATAAGGTTTTTCTCCTAAACATATAGTTTTGAAGGAAGGAAAGCCGGAAATACCCAATATCTTGTTCCAACAGGATATTGGGTATTTCTTTGTTTATTCTGAATCTTTCTATTCTGAATTCAATTAACGACGAGATTTAGTATCCTTTCTTGTACTTTCATAACTCGTGAAATGCCGAGTAGGCACGAATTCCCCCAATTTGCGACCCACCATAGGATTTGTTATGTAAATAGGTATATGTTCTTTTCCATTATGAATCGCGATTGTATGGCCAACCATTGCGGGTAGAATGCTAGATGCCCGGGACCACGTTACTATTATTTCTTTCTCCTCCTTCATATTGACCTTTTCGATTTTTGCCAATAAATGACGAGCTACAAAAGGATTCGTTTTTTTTCGTGTCACAGCTGATTACTCCTTTTTTTCATTTTAAAGAGTGGCATCCTATGTCCACTATCTCGATCGAGGTATGGAGGTCAGGATAAATAGAATAATAATGAATGGAAAAAAGAGAAAATCCTTTAGCTGGATAAGGGGCGGATGTAGCCAAGTGGATCAAGGCAGT
IPSUB663-18	-	rbcL	553	Japan	-	36.767387, 137.46935	AAGTGTTGGATTTAAAGCTGGTGTTAAGGATTATAAATTGACTTACTACACCCCGGAGTACGAAACCAAGGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAGCTCGGGGTTCCGCCTGAAGAAGCAGGAGCTGCAGTAGCTGCGGAATCTTCTACTGGTACATGGACAACTGTTTGGACTGATGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTATCACATCGAGCCCGTTCCTGGGGACCCAGATCAATATATCTGTTATGTAGCTTATCCATTAGACCTATTTGAAGAGGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAACGTATTTGGTTTCAAAGCCTTACGTGCTCTACGTTTGGAGGATCTACGAATTCCCCCTGCTTATGCAAAAACTTTCCAAGGTCCGCCTCACGGTATCCAAGTTGAAAGGGATAAGTTGAACAAGTACGGTCGTCCTTTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCAAAAAATTACGGTAGAGCGTGTTATGAGTGTCTA

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Microstegium vimineum

Basic Information

Taxonomic Information

Photos (5 photos)

Morphological Features

Host Plants (0 host plants)

Quarantine Status (31 records)

Distribution (25 countries)

Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

Genomes (1 records)

Transcriptomes (6 records)

DNA Barcodes (52 records)

Literature

State Information