Citrus dwarfing viroid
TaxID: 551523
Basic Information
Citrus dwarfing viroid
Citrus Dwarfing Viroid
Taxonomic Information
unclassified
unclassified
unclassified
unclassified
Pospiviroidae
Apscaviroid
Apscaviroid nanocitri
nan
No Rank
nan
k__unclassified;p__unclassified;c__unclassified;o__unclassified;f__Pospiviroidae;g__Apscaviroid;s__Apscaviroid nanocitri
nan
Viruses/Viroids
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Paraguay | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_000856305.1 | Complete Genome | - | - | - | - |
|
|
|
ViralProj14974 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR18360526 | - | - | - | 25253443 | USA: LREC, Exeter, CA | |
|
PRJNA816480 SRX14495163 SRP364701 general RNAseq of citrus trifoliata Illumina TruSeq Stranded mRNA Kit AF184147 {'host': 'Citrus trifoliata', 'isolate': 'AF184147', 'lab_host': 'not collected', 'geo_loc_name': 'USA: LREC, Exeter, CA', 'biosamplemodel': 'Viral', 'collection_date': '2016-04', 'isolation_source': 'field'} |
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| SRR18360525 | - | - | - | 24791258 | USA: LREC, Exeter, CA | |
|
PRJNA816480 SRX14495164 SRP364701 general RNAseq of citrus trifoliata Illumina TruSeq Stranded mRNA Kit AF184147 {'host': 'Citrus trifoliata', 'isolate': 'AF184147', 'lab_host': 'not collected', 'geo_loc_name': 'USA: LREC, Exeter, CA', 'biosamplemodel': 'Viral', 'collection_date': '2016-04', 'isolation_source': 'field'} |
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| SRR18360524 | - | - | - | 26970554 | USA: LREC, Exeter, CA | |
|
PRJNA816480 SRX14495165 SRP364701 general RNAseq of citrus trifoliata Illumina TruSeq Stranded mRNA Kit AF184147 {'host': 'Citrus trifoliata', 'isolate': 'AF184147', 'lab_host': 'not collected', 'geo_loc_name': 'USA: LREC, Exeter, CA', 'biosamplemodel': 'Viral', 'collection_date': '2016-04', 'isolation_source': 'field'} |
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Literature
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