Pythium aphanidermatum
TaxID: 65070
Basic Information
Pythium aphanidermatum
Foot Rot, rothalsråte
Pythium aphanidermatum is a soil borne plant pathogen. Pythium is a genus in the class Oomycetes, which are also known as water molds. Oomycetes are not true fungi, as their cell walls are made of cellulose instead of chitin, they are diploid in their vegetative state, and they form coenocytic hyphae (lacking crosswalls). Also, they reproduce asexually with motile biflagelette zoospores that require water to move towards and infect a host. Sexually, they reproduce with structures called antheridia, oogonia, and oospores.
from Wikipedia
Taxonomic Information
Eukaryota
Oomycota
Peronosporomycetes
Pythiales
Pythiaceae
Pythium
aphanidermatum
Undefined
Species
nan
d__Eukaryota;p__Oomycota;c__Peronosporomycetes;o__Pythiales;f__Pythiaceae;g__Pythium;s__Pythium aphanidermatum
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (12 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| Germany | Present | — |
| Egypt | Present | — |
| Spain | Present | — |
| France | Present | — |
| United Kingdom | Present | — |
| Japan | Present | — |
| Mexico | Present | — |
| Oman | Present | — |
| Poland | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_023337855.1 | Contig | 39 | 8 | 8 | - |
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ASM2333785v1 |
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Transcriptomes (2 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR32736172 | Mycelia | mycelia | - | 35256476 | United Kingdom | |
|
PRJNA1237323 SRX28022415 SRP570926 general RNA from P. aphanidermatum mycelium grown on cucumber Illumina TruSeq RNA V2 kit PT2-1-1 {'tissue': 'Mycelia', 'isolate': 'PT2-1-1', 'dev_stage': 'mycelia', 'geo_loc_name': 'United Kingdom', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2024', 'growth_protocol': 'on cucumber'} |
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| SRR32736171 | Mycelia | mycelia | - | 24001620 | United Kingdom | |
|
PRJNA1237323 SRX28022416 SRP570926 general RNA from P. aphanidermatum mycelium grown on PDB plates Illumina TruSeq RNA V2 kit PT2-1-2 {'tissue': 'Mycelia', 'isolate': 'PT2-1-2', 'dev_stage': 'mycelia', 'geo_loc_name': 'United Kingdom', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2024', 'growth_protocol': 'on PDB plates'} |
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Literature
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