Burkholderia cepacia complex
TaxID: 87882
Basic Information
Burkholderia cepacia complex
B. Cepacia Complex
Burkholderia cepacia complex (BCC) is a species complex consisting of Burkholderia cepacia and at least 20 different biochemically similar species of Gram-negative bacteria. They are catalase-producing and lactose-nonfermenting. Members of BCC are opportunistic human pathogens that most often cause pneumonia in immunocompromised individuals with underlying lung disease (such as cystic fibrosis or chronic granulomatous disease). Patients with sickle-cell haemoglobinopathies are also at risk. The species complex also attacks young onion and tobacco plants, and displays a remarkable ability to digest oil.
from Wikipedia
Taxonomic Information
Bacteria
Pseudomonadota
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Burkholderia
cepacia
Unclassified
Species
nan
d__Bacteria;p__Pseudomonadota;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__unclassified
nan
Prokaryotes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Haiti | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (0 records)
Data source: NCBI.
No genome records available.
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR34323902 | - | - | - | 46663267 | - | |
|
PRJNA1284919 SRX29489473 SRP596498 RNA-seq of B. ambifaria in Clinostat (Vertical orientation) at Day 3 Total RNA integrity was confirmed using the Agilent 2100 Bioanalyzer, and mRNA was enriched by rRNA removal. cDNA synthesis and library preparation were performed using random primers and the Nextera XT DNA Library Prep Kit for Illumina sequencing. AMMD {'strain': 'AMMD', 'sample_type': 'mRNA control-BA- R3- Day 3', 'geo_loc_name': 'not provided', 'type-material': 'type strain of Burkholderia ambifaria', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-05-28', 'isolation_source': 'bacterial culture- Day 3'} |
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| SRR34323900 | - | - | - | 34860066 | - | |
|
PRJNA1284919 SRX29489475 SRP596498 RNA-seq of B. ambifaria in Clinostat (Vertical orientation) at Day 3 Total RNA integrity was confirmed using the Agilent 2100 Bioanalyzer, and mRNA was enriched by rRNA removal. cDNA synthesis and library preparation were performed using random primers and the Nextera XT DNA Library Prep Kit for Illumina sequencing. AMMD {'strain': 'AMMD', 'sample_type': 'mRNA control-BA- R2- Day 3', 'geo_loc_name': 'not provided', 'type-material': 'type strain of Burkholderia ambifaria', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-05-28', 'isolation_source': 'bacterial culture- Day 3'} |
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| SRR34323899 | - | - | - | 45694414 | - | |
|
PRJNA1284919 SRX29489476 SRP596498 RNA-seq of B. ambifaria in Clinostat (Vertical orientation) at Day 3 Total RNA integrity was confirmed using the Agilent 2100 Bioanalyzer, and mRNA was enriched by rRNA removal. cDNA synthesis and library preparation were performed using random primers and the Nextera XT DNA Library Prep Kit for Illumina sequencing. AMMD {'strain': 'AMMD', 'sample_type': 'mRNA control-BA- R1- Day 3', 'geo_loc_name': 'not provided', 'type-material': 'type strain of Burkholderia ambifaria', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-05-28', 'isolation_source': 'bacterial culture- Day 3'} |
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Literature
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