Schizophyllum commune
TaxID: 5334
Basic Information
Schizophyllum commune
Common Porecrust, Split Gill Fungus
Schizophyllum commune is a species of fungus in the genus Schizophyllum. The mushroom resembles undulating waves of tightly packed corals or a loose Chinese fan. Gillies or split-gills vary from creamy yellow to pale white in colour. The cap is 1 C4 centimetres (3?8 C1+5?8 in) wide with a dense yet spongey body texture. It is found on rotting wood throughout the world. This fungus is an opportunistic environmental pathogen.
from Wikipedia
Taxonomic Information
Eukaryota
Basidiomycota
Agaricomycetes
Agaricales
Schizophyllaceae
Schizophyllum
commune
Undefined
Species
nan
d__Eukaryota;p__Basidiomycota;c__Agaricomycetes;o__Agaricales;f__Schizophyllaceae;g__Schizophyllum;s__Schizophyllum commune
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Sudan | Quarantine pests | — |
Distribution (155 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Angola | Present | — |
| Albania | Present | — |
| Algeria | Present | — |
| Argentina | Present | — |
| Armenia | Present | — |
| Australia | Present | — |
| Austria | Present | — |
| Azerbaijan | Present | — |
| Burundi | Present | — |
| Belgium | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_001599475.1 | Scaffold | 39 | 370 | 729 | - |
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JCM_22674_assembly_v001 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR31678442 | - | - | - | 12565828 | Netherlands: Utrecht | |
|
PRJNA1196894 SRX27040860 SRP550789 fungi S. commune wild type strain H4-8, in co-culture with T. harzianum CBS 354.33, sampled from direct interaction zone RNA was extracted with TRIzol (Thermofisher Scientific, USA) using the manufacturers protocol. Next, the sample was treated with DNAse I to remove genomic DNA and cleaned up using the RNA Cleanup protocol from the QIAGEN RNeasy Plant Mini Kit (QIAGEN, The Netherlands). Illumina libraries were generated for RNA-Seq and subsequently sequenced on the Illumina NextSeq 2000 platform in 2 x 50 bp mode (Utrecht Sequencing Facility; www.useq.nl). H4-8 {'strain': 'H4-8', 'competitor': 'Trichoderma harzianum', 'sample_type': 'Mixed culture', 'geo_loc_name': 'Netherlands: Utrecht', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2023-05-11', 'isolation_source': 'cultured on solid medium', 'biological_replicate': '1'} |
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| SRR31678441 | - | - | - | 12931810 | Netherlands: Utrecht | |
|
PRJNA1196894 SRX27040861 SRP550789 fungi S. commune wild type strain H4-8, in co-culture with T. harzianum CBS 354.33, sampled from direct interaction zone RNA was extracted with TRIzol (Thermofisher Scientific, USA) using the manufacturers protocol. Next, the sample was treated with DNAse I to remove genomic DNA and cleaned up using the RNA Cleanup protocol from the QIAGEN RNeasy Plant Mini Kit (QIAGEN, The Netherlands). Illumina libraries were generated for RNA-Seq and subsequently sequenced on the Illumina NextSeq 2000 platform in 2 x 50 bp mode (Utrecht Sequencing Facility; www.useq.nl). H4-8 {'strain': 'H4-8', 'competitor': 'Trichoderma harzianum', 'sample_type': 'Mixed culture', 'geo_loc_name': 'Netherlands: Utrecht', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2023-05-11', 'isolation_source': 'cultured on solid medium', 'biological_replicate': '2'} |
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| SRR31678440 | - | - | - | 11920450 | Netherlands: Utrecht | |
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PRJNA1196894 SRX27040862 SRP550789 fungi S. commune wild type strain H4-8, in co-culture with T. harzianum CBS 354.33, sampled from direct interaction zone RNA was extracted with TRIzol (Thermofisher Scientific, USA) using the manufacturers protocol. Next, the sample was treated with DNAse I to remove genomic DNA and cleaned up using the RNA Cleanup protocol from the QIAGEN RNeasy Plant Mini Kit (QIAGEN, The Netherlands). Illumina libraries were generated for RNA-Seq and subsequently sequenced on the Illumina NextSeq 2000 platform in 2 x 50 bp mode (Utrecht Sequencing Facility; www.useq.nl). H4-8 {'strain': 'H4-8', 'competitor': 'Trichoderma harzianum', 'sample_type': 'Mixed culture', 'geo_loc_name': 'Netherlands: Utrecht', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2023-05-11', 'isolation_source': 'cultured on solid medium', 'biological_replicate': '3'} |
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Literature
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