Lamium amplexicaule

TaxID: 53160

Basic Information

Scientific Name *

Lamium amplexicaule

Common Name

Ballıbaba, Henbit Deadnettle, henbit deadnettle

Introduction

Lamium amplexicaule, commonly known as henbit dead-nettle, is a species of Lamium native to most of Europe, Asia and northern Africa. The specific name refers to the leaves, which are amplexicaul (clasping the stem).

from Wikipedia

Taxonomic Information

Domain/Kingdom

Eukaryota

Phylum

Streptophyta

Class

Magnoliopsida

Order

Lamiales

Family

Lamiaceae

Genus

Lamium

Species

amplexicaule

Subspecies

Unclassified

Photos (5 photos)

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Morphological Features

No morphological description available.

Host Plants (0 host plants)

Data sources: EPPO Global Database and relevant literature.

No host plants available.

Quarantine Status (2 records)

Data sources: IPPC website and national quarantine websites; verified by human review.

Country	Status	Year Added
Nicaragua	Absent	—
Paraguay	Quarantine pests	—

Distribution (94 countries)

Data Sources: EPPO Global Database and GBIF.

94

Present

0

Absent

0

Unknown/Other

Country	Status	State
Albania	Present	—
Algeria	Present	—
Andorra	Present	—
Argentina	Present	—
Armenia	Present	—
Australia	Present	—
Austria	Present	—
Azerbaijan	Present	—
Belgium	Present	—
Bulgaria	Present	—

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Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

Download CSV

Genomes (1 records)

Data source: NCBI.

Assembly Accession	Assembly Level	Genome Size(Mb)	Contig N50(Kb)	Scaffold N50(Kb)	BUSCO%	Downloads	Actions
GCA_964059565.1	Chromosome	521	5129	53956	-	FASTA
Assembly Name daLamAmpl1.hap1.1

Transcriptomes (3 records)

Data source: NCBI.

Run ID	Tissue	Developmental Stage	Sex	Read Count	Location	Actions
SRR33120506	Leaf	not collected	-	39514427	Korea: Mokpo	Download NCBI
BioProject PRJNA1245620 Experiment ID SRX28384101 Study ID SRP578343 Category weed Title Salt replicate 1 Design Description Leaf RNA of Lamium amplexicaule was sequenced as 101 bp paired-end reads using the TruSeq Stranded mRNA kit and Illumina NovaSeq 6000. Strain Salt replicate 1 Sample Attributes {'age': 'not collected', 'temp': '25±1℃', 'tissue': 'Leaf', 'ecotype': 'Goha island', 'isolate': 'Salt replicate 1', 'lat_lon': '34.76 N 126.36 W', 'cell_line': 'not collected', 'cell_type': 'not collected', 'dev_stage': 'not collected', 'phenotype': 'not collected', 'treatment': 'Salt(34‰) stress', 'sample_type': 'tissue sample', 'collected_by': 'Ha Yeun Song, Young Ji Choi', 'geo_loc_name': 'Korea: Mokpo', 'biosamplemodel': 'Plant', 'collection_date': '2023-04-19', 'isolation_source': 'Goha-do, Mokpo-si, Korea', 'specimen_voucher': 'HNIBR_HNIBRVP28527', 'biomaterial_provider': 'Ha Yeun Song, Honam National institute of Biological Resources'}
SRR33120505	Leaf	not collected	-	40164607	Korea: Mokpo	Download NCBI
BioProject PRJNA1245620 Experiment ID SRX28384102 Study ID SRP578343 Category weed Title Salt replicate 2 Design Description Leaf RNA of Lamium amplexicaule was sequenced as 101 bp paired-end reads using the TruSeq Stranded mRNA kit and Illumina NovaSeq 6000. Strain Salt replicate 2 Sample Attributes {'age': 'not collected', 'temp': '25±1℃', 'tissue': 'Leaf', 'ecotype': 'Goha island', 'isolate': 'Salt replicate 2', 'lat_lon': '34.76 N 126.36 W', 'cell_line': 'not collected', 'cell_type': 'not collected', 'dev_stage': 'not collected', 'phenotype': 'not collected', 'treatment': 'Salt(34‰) stress', 'sample_type': 'tissue sample', 'collected_by': 'Ha Yeun Song, Young Ji Choi', 'geo_loc_name': 'Korea: Mokpo', 'biosamplemodel': 'Plant', 'collection_date': '2023-04-19', 'isolation_source': 'Goha-do, Mokpo-si, Korea', 'specimen_voucher': 'HNIBR_HNIBRVP28527', 'biomaterial_provider': 'Ha Yeun Song, Honam National institute of Biological Resources'}
ERR15551454	-	-	hermaphrodite and monoecious	29555168	-	Download NCBI
BioProject PRJEB74749 Experiment ID ERX14955023 Study ID ERP159381 Category weed Title Illumina NovaSeq X paired end sequencing Design Description Illumina sequencing of sample accession SAMEA9144068 for study accession PRJEB74749. This submission includes reads tagged with the sequence GGTATGCA. Sample Attributes {'gal': 'Royal Botanic Gardens Kew', 'sex': 'hermaphrodite and monoecious', 'tolid': 'daLamAmpl1', 'habitat': 'lawn', 'lifestage': 'vegetative structure', 'broker name': 'COPO', 'external id': 'SAMEA9144068', 'sample name': '60acddf3ae4f4b00016da3ab', 'specimen id': 'KDTOL10212', 'collected by': 'MAARTEN J. M. CHRISTENHUSZ', 'insdc status': 'public', 'project name': 'DTOL', 'submitter id': '60acddf3ae4f4b00016da3ab', 'gal_sample_id': 'KDTOL10212', 'identified by': 'MAARTEN J. M. CHRISTENHUSZ', 'organism part': 'LEAF', 'collection date': '2021-05-17', 'ena-last-update': '2021-06-09T15:50:01Z', 'scientific_name': 'Lamium amplexicaule', 'ena-first-public': '2021-06-09T15:50:01Z', 'specimen voucher': 'MC9189', 'insdc center name': 'EarlhamInstitute', 'insdc last update': '2021-06-09T15:50:01Z', 'insdc first public': '2021-06-09T15:50:01Z', 'sample derived from': 'SAMEA9143103', 'collecting institution': 'ROYAL BOTANIC GARDENS KEW', 'identifier_affiliation': 'Independent', 'geographic location (latitude)': '51.472', 'geographic location (elevation)': '8', 'geographic location (longitude)': '-0.2983', 'geographic location (country and/or sea)': 'United Kingdom', 'geographic location (region and locality)': 'Surrey \| Richmond \| Kew'}

DNA Barcodes (45 records)

View all

Data source: BOLD.

Process ID	BIN	Marker	Length	Country	Date	Lat/Lon	Sequence
SERC073-14	-	trnH-psbA	295	United States	2012-02-27	38.889, -76.554	ATAATTTCCCTCTAGACCTAGCTTCTATCGAAGCTCCA---ACAAATGGATAA--GA----C-------------------------T----------T----------GGT-------------------------CTT------------------------------A-------------------------GTGT-A-TAG---------------GA----------T---------------------------------------------------------------------------------------------------------------------T-----------------------T----------TTTG------------------------------AAAATAGAATAGATAAATAT-------------------------------AA-------------------------G-----G---------AG---------------------------------CAAT------------A--------------------------------------------------------------------------------------------------------------------------------ACCCT-------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGACAAAACAA--------------------GA------------------------------AA-----------GAGTTTA---------TTG--------CTCC-----------------------------------------------------------------------------T---TAATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTCAATTACTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTTTCCATTACAGGATTTAGAGGAAG-------------------------------------------------------------------------AAAGAAGAAAAAAAGGATTGAAAT----TCAATTTA--------TTTTGAATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGTAA--ATTCATT-----TTCATTATA-------------------------------------------CTATATATT-------------------------------------------------------------------------------------------------------------------------------------------------AGAGGGGCGGATGTAGCCAAG--------------
SERC073-14	-	rbcLa	553	United States	2012-02-27	38.889, -76.554	AGGTGTTGGATTCAAAGCGGGTGTTAAAGAGTACAAATTGACTTATTATACCCCTGAATACGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCTGGAGTTCCGCCCGAAGAAGCAGGGGCCGCGGTAGCTGCCGAATCTTCGACTGGTACATGGACAACTGTGTGGACCGATGGACTTACCAGCCTTGATCGTTACAAAGGGCGATGCTACGACATCGAGCCCGTTCTTGGAGAAAAGGATCAATATATCTGTTATGTAGCTTACCCTTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCGATTGTAGGAAATGTATTTGGATTCAAAGCCCTACGTGCTCTACGTCTGGAAGATCTGCGAATCCCTCCTGCTTATGTTAAAACTTTCCAAGGCCCACCTCATGGGATCCAAGTTGAGAGAGATAAATTGAACAAGTATGGTCGTCCTCTGTTGGGATGTACTATTAAACCTAAATTGGGGTTATCCGCTAAAAACTATGGTAGAGCTGTTTATGAATGTCTT
SERC073-14	-	matK	746	United States	2012-02-27	38.889, -76.554	-------TGCATTTATTACGAGTCTTTCTCAACGAATATTGTAATTGGAATAGTCTTATTATTCCA------AAGAAAGCTAGTTCCCATTCT---TCAAAA------AAAAATAAAAGATTATTATTATTCTTATATAATTCTCATGTATGTGAATATGAATCCATTTTCGTCTTTCTACGTAACCAATCTTTTCATTTACGATCAACATCTTCTGAAGTTTTTCTGGAAAGAATCTATTTCTATATAAAAATA------GAATGTCTTGTG------AACGTCTTTGTTAAGATTAAGGATTTT---GGGGCAAACCTGCGGTTGGTCAAGGAATCTTTCATGCATTATATTAGGTATCAAAAAAGATCCATTCTGGCTTCAAATGGCACATTTCTTTTCATGCAGAAATGGAAATTTTACCTTGTCACTTTTTGGCAATGGCATTTTTCGGTGTGGTTTCATCCAAGAAGCATTTATATAAACGAATTATCCAAGCATCCCCTTGAGTTTTTGGGCTATCTTTCAAGTGTGCGAATGAACCCTTCC---GTAGTACGCAGTCAAATTCTAGAAAATGCATTTCTAATCAATAATGCTATT------AAGAAGTTTGAGACTCTTGTTCCAATTATTCCTCTGATTGCATCATTGGCTAAAGCAAAATTTTGTAACGTATTGGGGCATCCCGTTAGTAAGCCGACTCGGACAGATTTATCAGATTCGAATATTATTGACCGATTTGGGCGTATATGCAGAAATATTTCTCGTTATCATAGTGGATCTGCA------------
SDH1320-14	-	rbcLa	552	United States	1969-04-28	33.345, -116.9	GGTGTTGGATTCAAAGCGGGTGTTAAAGAGTACAAATTGACTTATTATACCCCTGAATACGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCTGGAGTTCCGCCCGAAGAAGCAGGGGCCGCGGTAGCTGCCGAATCTTCGACTGGTACATGGACAACTGTGTGGACCGATGGACTTACCAGCCTTGATCGTTACAAAGGGCGATGCTACGACATCGAGCCCGTTCTTGGAGAAAAGGATCAATATATCTGTTATGTAGCTTACCCTTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCGATTGTAGGAAATGTATTTGGATTCAAAGCCCTACGTGCTCTACGTCTGGAAGATCTGCGAATCCCTCCTGCTTATGTTAAAACTTTCCAAGGCCCACCTCATGGGATCCAAGTTGAGAGAGATAAATTGAACAAGTATGGTCGTCCTCTGTTGGGATGTACTATTAAACCTAAATTGGGGTTATCCGCTAAAAACTATGGTAGAGCTGTTTATGAATGTCTT
SDH1320-14	-	matK	790	United States	1969-04-28	33.345, -116.9	CATGTGGAAATATTGGTTCAAATCCTTCGATATTGGGTAAAAGATGCTTCCTCCTTGCATTTATTACGAGTCTTTCTCAACGAATATTGTAATTGGAAT------------------AGTCTTATTATTCCAAAGAAAGCT------AGTTCCCCTTCTTCA------------------------------AAAAAAAAT------------AAAAGATTATTATTATTCTTATATAATTCTCATGTATGTGAATATGAATCCATTTTCGTCTTTCTACGTAACCAATCTTTTCATTTACGATCAACATCTTCTGAAGTTTTTCTGGAAAGAATCTATTTCTATATA---------------AAAATAGAATGTCTTGTG---------------AACGTCTTTGTTAAGATTAAGGATTTTGGGGCAAAC---------------CTGCGGTTGGTC------AAGGAATCTTTCATGCATTATATTAGGTATCAAAAAAGATCCATTCTGGCTTCAAATGGC---ACATTTCTTTTCATGCAG---AAATGGAAATTTTACCTTGTCACTTTTTGGCAATGGCATTTTTCGGTGTGG---TTTCATCCA------AGAAGCATTTATATAAAC------GAATTATCCAAGCATCCC---------CTTGAGTTTTTGGGC------TATCTTTCAAGT------GTGCGAATGAACCCTTCCGTAGTACGCAGTCAAATTCTAGAAAATGCA---TTTCTAATCAATAATGCTATTAAG------AAGTTTGAGACTCTTGTTCCAATTATTCCTCTGATTGCATCATTGGCTAAAGCAAAATTTTGTAACGTATTGGGGCATCCCGTTAGTAAGCCGACTCGGACAGATTTATCAGATTCGAATATTATTGACCGATTTGGGCGTATATGCAGAAATATTTCTCGTTATCATA-----------
POWNA402-10	-	rbcL	542	United Kingdom	1996-05-10	51.513294, -3.101639	AGGTGTTGGATTCAAAGCGGGTGTTAAAGAGTACAAATTGACTTATTATACCCCTGAATACGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCTGGAGTTCCGCCCGAAGAAGCAGGGGCCGCGGTAGCTGCCGAATCTTCGACTGGTACATGGACAACTGTGTGGACCGATGGACTTACCAGCCTTGATCGTTACAAAGGGCGATGCTACGACATCGAGCCCGTTCTTGGAGAAAAGGATCAATATATCTGTTATGTAGCTTACCCTTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCGATTGTAGGAAATGTATTTGGATTCAAAGCCCTACGTGCTCTACGTCTGGAAGATCTGCGAATCCCTCCTGCTTATGTTAAAACTTTCCAAGGCCCACCTCATGGGATCCAAGTTGAGAGAGATAAATTGAACAAGTATGGTCGTCCTCTGTTGGGATGTACTATTAAACCTAAATTGGGGTTATCCGCTAAAAACTATGGTAGAGCTGTTT
POWNA402-10	-	matK	833	United Kingdom	1996-05-10	51.513294, -3.101639	ATATGGTAATACCTCGCCCTGTTCATGTGGAAATATTGGTTCAAATCCTTCGATATTGGGTAAAAGATGCTTCCTCCTTGCATTTATTACGAGTCTTTCTCAACGAATATTGTAATTGGAATAGTCTTATTATTCCAAAGAAAGCTAGTTCCCCTTCTTCAAAAAAAAATAAAAGATTATTATTATTCTTATATAATTCTCATGTATGTGAATATGAATCCATTTTCGTCTTTCTACGTAACCAATCTTTTCATTTACGATCAACATCTTCTGAAGTTTTTCTGGAAAGAATCTATTTCTATATAAAAATAGAATGTCTTGTGAACGTCTTTGTTAAGATTAAGGATTTTGGGGCAAACCTGCGGTTGGTCAAGGAATCTTTCATGCATTATATTAGGTATCAAAAAAGATCCATTCTGGCTTCAAATGGCACATTTCTTTTCATGCAGAAATGGAAATTTTACCTTGTCACTTTTTGGCAATGGCATTTTTCGGTGTGGTTTCATCCAAGAAGCATTTATATAAACGAATTATCCAAGCATCCCCTTGAGTTTTTGGGCTATCTTTCAAGTGTGCGAATGAACCCTTCCGTAGTACGCAGTCAAATTCTAGAAAATGCATTTCTAATCAATAATGCTATTAAGAAGTTTGAGACTCTTGTTCCAATTATTCCTCTGATTGCATCATTGGCTAAAGCAAAATTTTGTAACGTATTGGGGCATCCCGTTAGTAAGCCGACTCGGACAGATTTATCAGATTCGAATATTATTGACCGATTTGGGCGTATATGCAGAAATATTTCTCGTTATCATAGTGGATCTGCAAAAAAAAAG
POWNA1238-12	-	rbcL	542	United Kingdom	1996-10-07	51.48424, -3.176547	AGGTGTTGGATTCAAAGCGGGTGTTAAAGAGTACAAATTGACTTATTATACCCCTGAATACGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCTGGAGTTCCGCCCGAAGAAGCAGGGGCCGCGGTAGCTGCCGAATCTTCGACTGGTACATGGACAACTGTGTGGACCGATGGACTTACCAGCCTTGATCGTTACAAAGGGCGATGCTACGACATCGAGCCCGTTCTTGGAGAAAAGGATCAATATATCTGTTATGTAGCTTACCCTTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCGATTGTAGGAAATGTATTTGGATTCAAAGCCCTACGTGCTCTACGTCTGGAAGATCTGCGAATCCCTCCTGCTTATGTTAAAACTTTCCAAGGCCCACCTCATGGGATCCAAGTTGAGAGAGATAAATTGAACAAGTATGGTCGTCCTCTGTTGGGATGTACTATTAAACCTAAATTGGGGTTATCCGCTAAAAACTATGGTAGAGCTGTTT
POWNA1238-12	-	matK	824	United Kingdom	1996-10-07	51.48424, -3.176547	ACCTCGCCCTGTTCATGTGGAAATATTGGTTCAAATCCTTCGATATTGGGTAAAAGATGCTTCCTCCTTGCATTTATTACGAGTCTTTCTCAACGAATATTGTAATTGGAATAGTCTTATTATTCCAAAGAAAGCTAGTTCCCCTTNTTCAAAAAAAAATAAAAGATTATTATTATTCTTATATAATTCTCATGTATGTGAATATGAATCCATTTTCGTCTTTCTACGTAACCAATCTTTTCATTTACGATCAACATCTTCTGAAGTTTTTCTGGAAAGAATCTATTTCTATATAAAAATAGAATGTCTTGTGAACGTCTTTGTTAAGATTAAGGATTTTGGGGCAAACCTGCGGTTGGTCAAGGAATCTTTCATGCATTATATTAGGTATCAAAAAAGATCCATTCTGGCTTCAAATGGCACATTTCTTTTCATGCAGAAATGGAAATTTTACCTTGTCACTTTTTGGCAATGGCATTTTTCGGTGTGGTTTCATCCAAGAAGCATTTATATAAACGAATTATCCAAGCATCCCCTTGAGTTTTTGGGCTATCTTTCAAGTGTGCGAATGAACCCTTCCGTAGTACGCAGTCAAATTCTAGAAAATGCATTTCTAATCAATAATGCTATTAAGAAGTTTGAGACTCTTGTTCCAATTATTCCTCTGATTGCATCATTGGCTAAAGCAAAATTTTGTAACGTATTGGGGCATCCCGTTAGTAAGCCGACTCGGACAGATTTATCAGATTCGAATATTATTGACCGATTTGGGCGTATATGCAGAAATATTTCTCGTTATCATAGTGGATCTGCAAAAAAAAAGAG
POWNA1235-12	-	rbcL	542	United Kingdom	1976-06-01	53.253704, -4.549724	AGGTGTTGGATTCAAAGCGGGTGTTAAAGAGTACAAATTGACTTATTATACCCCTGAATACGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCTGGAGTTCCGCCCGAAGAAGCAGGGGCCGCGGTAGCTGCCGAATCTTCGACTGGTACATGGACAACTGTGTGGACCGATGGACTTACCAGCCTTGATCGTTACAAAGGGCGATGCTACGACATCGAGCCCGTTCTTGGAGAAAAGGATCAATATATCTGTTATGTAGCTTACCCTTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCGATTGTAGGAAATGTATTTGGATTCAAAGCCCTACGTGCTCTACGTCTGGAAGATCTGCGAATCCCTCCTGCTTATGTTAAAACTTTCCAAGGCCCACCTCATGGGATCCAAGTTGAGAGAGATAAATTGAACAAGTATGGTCGTCCTCTGTTGGGATGTACTATTAAACCTAAATTGGGGTTATCCGCTAAAAACTATGGTAGAGCTGTTT

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Lamium amplexicaule

Basic Information

Taxonomic Information

Photos (5 photos)

Morphological Features

Host Plants (0 host plants)

Quarantine Status (2 records)

Distribution (94 countries)

Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

Genomes (1 records)

Transcriptomes (3 records)

DNA Barcodes (45 records)

Literature

State Information