Trypodendron domesticum

Antenal transcroptome of Trypodendron domesticum

Library construction method: Illumina TruSeq Stranded mRNA (polyA)Sequencing: Samples were sequenced on NovaSeq6000 (NovaSeq Control Software 1.8.0/RTA v3.4.4) with a 151nt(Read1)-19nt(Index1)-10nt(Index2)-151nt(Read2) setup using 'NovaSeqXp' workflow in 'S4' mode flowcell. The Bcl to FastQ conversion was performed using bcl2fastq_v2.20.0.422 from the CASAVA software suite. The quality scale used is Sanger / phred33 / Illumina 1.8+.Data Flow: Raw sequencing data is demultiplexed and converted to FastQ on site before being transferred securely to UPPMAX for delivery.Data Processing: To ensure that all sequenced data meets our guarantee of data quality and quantity, a number of standardised bioinformatics quality control checks are performed before delivery. These include checking the yield, sequence read quality and cross-sample contamination.

{'host': 'maple (Acer spp.), alder (Alnus spp.), birch (Betula spp.), Caragana spp., Carpinus spp., chestnut (Castanea sativa), hawthorn (Crataegus spp.), beech (Fagus spp.), ash (Fraxinus spp.), holly (Ilex aquifolium), walnut (Juglans spp.), apple (Malusdomestica), mulberry (Morus alba), black locust (Robinia pseudoacacia), willow (Salix caprea), mountain ash (Sorbus spp.), linden (Tilia spp.), stone fruits (Prunus), and oak (Quercus sp.)', 'breed': '-', 'tissue': 'Antennae', 'isolate': '-', 'geo_loc_name': 'Sweden', 'biosamplemodel': 'Invertebrate', 'collection_date': '2021-05'}