Lygodium japonicum

TaxID: 13824

Basic Information

Scientific Name *

Lygodium japonicum

Common Name

Japanese Climbing Fern, Japanese climbing fern

Introduction

Lygodium japonicum is a species of fern that is known by the common names Japanese climbing fern and vine-like fern. It is native to eastern Asia, from Pakistan through India east to Taiwan, Japan, Korea, and south through southeastern Asia to New Guinea. The fern is present in the southeastern United States, Puerto Rico, South Africa, and Australia as an introduced species.

from Wikipedia

Taxonomic Information

Domain/Kingdom

Eukaryota

Phylum

Streptophyta

Class

Polypodiopsida

Order

Schizaeales

Family

Lygodiaceae

Genus

Lygodium

Species

japonicum

Subspecies

Unclassified

Photos (5 photos)

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Morphological Features

No morphological description available.

Host Plants (0 host plants)

Data sources: EPPO Global Database and relevant literature.

No host plants available.

Quarantine Status (29 records)

Data sources: IPPC website and national quarantine websites; verified by human review.

Country	Status	Year Added
Austria	IAS of Union concern	2019
Belgium	IAS of Union concern	2019
Bulgaria	IAS of Union concern	2019
Cyprus	IAS of Union concern	2019
Czechia	IAS of Union concern	2019
Germany	IAS of Union concern	2019
Denmark	IAS of Union concern	2019
EPPO A1	Absent	—
Spain	IAS of Union concern	2019
Estonia	IAS of Union concern	2019

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Distribution (41 countries)

Data Sources: EPPO Global Database and GBIF.

40

Present

1

Absent

0

Unknown/Other

Country	Status	State
Australia	Present
Bangladesh	Present	—
Belize	Present	—
Bhutan	Present	—
Central African Republic	Present	—
Cambodia	Present	—
Canada	Present	—
China	Present	—
Costa Rica	Present	—
Germany	Present	—

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Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

Download CSV

Genomes (0 records)

Data source: NCBI.

No genome records available.

Transcriptomes (3 records)

Data source: NCBI.

Run ID	Tissue	Developmental Stage	Sex	Read Count	Location	Actions
SRR5499391	leaves	-	-	14723490	China: Guangdong	Download NCBI
BioProject PRJNA384992 Experiment ID SRX2779500 Study ID SRP106198 Category general Title Lja_mRNA Design Description Young aerial parts were collected and total RNA was extracted from ground plant tissues using a modified CTAB method. The mRNA library was constructed using NEBNext¨ mRNA Library Prep Reagent Set for illumina (NEB, E6100L), and pooled and sequenced (single end, 125bp). Sample Attributes {'tissue': 'leaves', 'sample_type': 'tissue sample', 'geo_loc_name': 'China: Guangdong', 'biosamplemodel': 'Plant', 'specimen_voucher': 'SZU'}
ERR2040946	-	-	-	7276896	-	Download NCBI
BioProject PRJEB21674 Experiment ID ERX2100003 Study ID ERP023948 Category weed Title Illumina HiSeq 2000 paired end sequencing Sample Attributes {'sequencer': 'HiSeq', 'external id': 'SAMEA104170990', 'sample name': 'PBUU', 'tissue type': 'mix of fertile and sterile leaf tissue', 'insdc status': 'public', 'submitter id': 'PBUU', 'source_mat_id': 'Rothfels 4110 (DUKE)', 'ena last update': '2017-07-23', 'ena first public': '2017-07-23', 'insdc center name': 'Department of Biological Sciences', 'insdc last update': '2017-07-23T05:36:42Z', 'insdc center alias': 'Department of Biological Sciences', 'insdc first public': '2017-07-23T17:01:29Z'}
SRR6920701	young leaves	-	-	14723490	China: Shanghai	Download NCBI
BioProject PRJNA422112 Experiment ID SRX3868024 Study ID SRP126570 Category general Title RNA-Seq of ferns Design Description insert (125-300bp) Sample Attributes {'tissue': 'young leaves', 'geo_loc_name': 'China: Shanghai', 'biosamplemodel': 'Plant'}

DNA Barcodes (24 records)

View all

Data source: BOLD.

Process ID	BIN	Marker	Length	Country	Date	Lat/Lon	Sequence
ITSAJ4232-14	-	ITS2	265	-	-	-	CTAAACCCCCCACACCCTTCTCCTTTCTTCGGGGGGAGGGTGGAATTGGTCGTCCGCGCGCCCGTGTTCCTCTCTTTTGGAGCGCAAGGGATGCCGCGGTTGGCTGAAATGTATCGGTAGCACCGTGCGGCGATGTTGCTCCGCAAGGGTGGTCCGTCCCCTCGCTCGAGGTGGCGGCTATTTGCGGGTGCGTCCTCGAGGGTGCGTGTGCCGGATCGGGCTCTTCGGAGTCGAGGCTCGTCCTCGGCGACTCGAAACACAACTC
ITSAJ4231-14	-	ITS2	266	-	-	-	CTAAACCCCCCCACACCCTCCCCCTTTCTTCGGGTCGAGGGTGGAATTGGTCGTCCGTGCGCCCTTGTTCCTCTCTTTTGGAGCACAAGGGATGCCGCGGTTGGCTGAAATGTATCGGGAGCACCGTGCGGCGATGTTGCTCCGCAAGGGTGGTTCGTTCCCTCGTTCGAGGCGGCGGCTGTTTGCGGGTGCGTCTTCGAGGGTGCGCGTGCCGGATCGGGCTCTTCGGAGTCGAGGCTTGCCCTCGGCGATTCGAAACACAACTC
GRDMO542-21	-	trnH-psbA	472	United States	2019-03-20	38.61447, -90.25909	ATAACTTCCCTCTAGACTTAGCTTCTATTGAAGCTCCTTCTGTAAACGGATAATACTTTTCTGGTCCTGCAGTATAATGAAATACCAAGCCTTCTCTTTTTCAAAGGCTTGGTATTTCACGAAACTGAGACGAAACTGAGTCCTATCGAACAGATAGAAAGAATTGTTATCGTCTGCCGTGACTCCACGCGATGGGCTCTCGATTCTGAATCCTGAAAAATATTTAGAATACTCTTCTACACCTGTAAGAAGCATCCAATTTTTTTTTATTCCAATTTACGAAATGGTTGCAATCCCGCGCTCATTGCAATGAATCGAAAACACATTCTTTATGAGATGGATCTACCATTCAAAATATGGACGAATGAAACGTTTCTCAATTGAATGACCCTGTAGAATAGATTCTGTTCCCTTCTACGTTTCAAGAACAAGTAAGGGGAGGGGCGGACGTAGCCAAGTGGATCAAGGCAAT
GRDMO542-21	-	rbcL	553	United States	2019-03-20	38.61447, -90.25909	AGGTATTGGATTCAAAGCTGGTGTTAGAGATTATCGATTGACCTACTACACTCCCGAATATGAAACAAAAGATACTGATATCTTAGCAGCTTTTCGAATGACCCCACAACCCGGAGTACCTCCCGAAGAAGCTGGAGCTGCAGTAGCTGCAGAATCTTCTACAGGTACGTGGACCACAGTCTGGACTGATGGGCTCACCAGTCTTGATCGTTACAAAGGTCGATGCTACGATATTGAACCCGTTGCTGGGGAGGAAAATCAATACATAGCCTATGTAGCTTATCCTTTGGATTTGTTTGAAGAAGGTTCCGTTACTAATATGTTCACCTCCATTGTAGGTAATGTATTCGGATTCAAAGCCTTACGGGCCTTACGCTTAGAAGATCTGAGAATCCCTCCTGCTTATTCAAAAACCTTCATGGGTCCTCCTCATGGTATCCAAGTCGAAAGGGACAAATTGAACAAATATGGTCGCCCCTTATTAGGATGTACGATTAAGCCCAAGTTGGGACTATCTGCCAAAAATTATGGTAGAGCTGTCTATGAATGCCTC
GRDMO542-21	-	ITS2	382	United States	2019-03-20	38.61447, -90.25909	TGCAGAATTCCGCGAATCATCGAGTCTTTGAACGCAACTTGCGCCCGCGGCTCGTCCAAGGGCATGCCTGCTTGAGCGTCCCTAAACCCCCCACACCCTYCTCCTTTCTTCGGGGGGAGGGTGGAATTGGTCGTCCGCGCGCCCGTGTTCCTCTCTTTTGGAGCGCAAGGGATGCCGCGGTTGGCTGAAATGTATCGGTAGCACCGTGCGGCGATGTTGCTCCGCAAGGGTGGTCCGTCCCCTCGCTCGAGGTGGCGGCTATTTGCGGGTGCGTCCTCGAGGGTGCGTGTGCCGGATCGGGCTCTTCGGAGTCGAGGCTCGTCCTCGGCGACTCGAAACACAACTCGGACCTCAAATCAGGCAAGGCTACCCGCTGAGTTTAA
GBVQ1942-13	-	rbcL	501	-	-	-	---------------GGTGTTAGAGATTAT------------CGATTGACCTACTACACT---CCCGAATATGAAACAAAAGATACTGATATCTTAGCAGCTTTTCGAATGACCCCACAACCCGGAGTACCTCCCGAAGAAGCTGGAGCTGCAGTAGCTGCAGAATCTTCT---ACAGGTACGTGGACC---ACAGTCTGGACTGATGGG---CTCACCAGTCTTGATCGTTACAAAGGTCGATGCTACGATATTGAACCCGTTGCTGGGGAGGAA---AATCAATACATAGCCTATGTAGCTTATCCTTTGGATTTGTTTGAAGAA---GGTTCCGTT---ACTAATATGTTCACC---TCCATTGTAGGTAATGTATTC---GGATTCAAAGCCTTACGG---GCCTTACGCTTA---GAAGATCTGAGA---ATCCCTCCTGCTTATTCAAAAACC---TTCATGGGTCCT---CCTCATGGTATC---CAAGTCGAAAGGGAC---------AAA------TTGAAC---------------AAA---TAT---GGTCGCCCCTTATTAGGATGTACGATT---AAGCCCAAG---TTGGGACTA---TCT---GCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GBVQ1941-13	-	rbcL	537	-	-	-	ATTGGATTCAAAGCTGGTGTTAGAGATTAT------------CGATTGACCTACTACACT---CCCGAATATGAAACAAAAGATACTGATATCTTAGCAGCTTTTCGAATGACCCCACAACCCGGAGTACCTCCCGAAGAAGCTGGAGCTGCAGTAGCTGCAGAATCTTCT---ACAGGTACGTGGACC---ACAGTCTGGACTGATGGG---CTCACCAGTCTTGATCGTTACAAAGGTCGATGCTACGATATTGAACCCGTTGCTGGGGAGGAA---AATCAATACATAGCCTATGTAGCTTATCCTTTGGATTTGTTTGAAGAA---GGTTCCGTT---ACTAATATGTTCACC---TCCATTGTAGGTAATGTATTC---GGATTCAAAGCCTTACGG---GCCTTACGCTTA---GAAGATCTGAGA---ATCCCTCCTGCTTATTCAAAAACC---TTCATGGGTCCT---CCTCATGGTATC---CAAGTCGAAAGGGAC---------AAA------TTGAAC---------------AAA---TAT---GGTCGCCCCTTATTAGGATGTACGATT---AAGCCCAAG---TTGGGACTA---TCT---GCCAAAAATTATGGT---AGAGCT---GTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GBVQ1940-13	-	rbcL	576	-	-	-	CAAACAGAGACTAAAGCAGGTATTGGATTCAAAGCTGGTGTTAGAGATTATCGATTGACCTACTACACTCCCGAATATGAAACAAAAGATACTGATATCTTAGCAGCTTTTCGAATGACCCCACAACCCGGAGTACCTCCCGAAGAAGCTGGAGCTGCAGTAGCTGCAGAATCTTCTACAGGTACGTGGACCACAGTCTGGACTGATGGGCTCACCAGTCTTGATCGTTACAAAGGTCGATGCTACGATATTGAACCCGTTGCTGGGGAGGAAAATCAATACATAGCCTATGTAGCTTATCCTTTGGATTTGTTTGAAGAAGGTTCCGTTACTAATATGTTCACCTCCATTGTAGGTAATGTATTCGGATTCAAAGCCTTACGGGCCTTACGCTTAGAAGATCTGAGAATCCCTCCTGCTTATTCAAAAACCTTCATGGGTCCTCCTCATGGTATCCAAGTCGAAAGGGACAAATTGAACAAATATGGTCGCCCCTTATTAGGATGTACGATTAAGCCCAAGTTGGGACTATCTGCCAAAAATTATGGTAGAGCTGTCTATGAATGCCTCCGCGGT
GBVQ1939-13	-	rbcL	555	-	-	-	ATTGGATTCAAAGCTGGTGTTAGAGATTAT------------CGATTGACCTACTACACT---CCCGAATATGAAACAAAAGATACTGATATCTTAGCAGCTTTTCGAATGACCCCACAACCCGGAGTACCTCCCGAAGAAGCTGGAGCTGCAGTAGCTGCAGAATCTTCT---ACAGGTACGTGGACC---ACAGTCTGGACTGATGGG---CTCACCAGTCTTGATCGTTACAAAGGTCGATGCTACGATATTGAACCCGTTGCTGGGGAGGAA---AATCAATACATAGCCTATGTAGCTTATCCTTTGGATTTGTTTGAAGAA---GGTTCCGTT---ACTAATATGTTCACC---TCCATTGTAGGTAATGTATTC---GGATTCAAAGCCTTACGG---GCCTTACGCTTA---GAAGATCTGAGA---ATCCCTCCTGCTTATTCAAAAACC---TTCATGGGTCCT---CCTCATGGTATC---CAAGTCGAAAGGGAC---------AAA------TTGAAC---------------AAA---TAT---GGTCGCCCCTTATTAGGATGTACGATT---AAGCCCAAG---TTGGGACTA---TCT---GCCAAAAATTATGGT---AGAGCT---GTCTATGAATGCCTCCGCGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GBVQ1022-13	-	rbcL	1248	-	-	-	---------------------------------------------TTGACCTACTACACT---CCCGAATATGAAACAAAAGATACTGATATCTTAGCAGCTTTTCGAATGACCCCACAACCCGGAGTACCTCCCGAAGAAGCTGGAGCTGCAGTAGCTGCAGAATCTTCT---ACAGGTACGTGGACC---ACAGTCTGGACTGATGGG---CTCACCAGTCTTGATCGTTACAAAGGTCGATGCTACGATATTGAACCCGTTGCTGGGGAGGAA---AATCAATACATAGCCTATGTAGCTTATCCTTTGGATTTGTTTGAAGAA---GGTTCCGTT---ACTAATATGTTCACC---TCCATTGTAGGTAATGTATTC---GGATTCAAAGCCTTACGG---GCCTTACGCTTA---GAAGATCTGAGA---ATCCCTCCTGCTTATTCAAAAACC---TTCATGGGTCCT---CCTCATGGTATC---CAAGTCGAAAGGGAC---------AAA------TTGAAC---------------AAA---TAT---GGTCGCCCCTTATTAGGATGTACGATT---AAGCCCAAG---TTGGGACTA---TCT---GCCAAAAATTATGGT---AGAGCT---GTCTATGAATGCCTCCGTGGCGGACTGGATTTCACCAAGGAT------------------------GAT---------------------GAAAACGTTAATTCCCAACCGTTTATGCGTTGGAGGGATCGTTTC---TTG---TTC------------------------------------------------------------GTAGCAGAAGCT---CTTTTCAAGTCTCAGGCTGAA---ACTGGC---GAAATCAAGGGGCATTACTTAAACGCCACTGCGGGAACT---TGCGAGGAAATGATGAAAAGAGCAGTCTTC---GCT---AGGGAACTA------GGGGCGCCCATTGTCATGCACGACTATCTGACT------GGAGGATTCACC------------GCAAATACTAGTTTGGCTTTTTACTGTAGAGAT---AAT------GGATTGCTTTTA---CATATT---CACCGTGCAATGCATGCCGTTATC------------GAC------AGACAAAAAAACCACGGTATGCATTTCCGCGTATTGGCTAAAGGTCTA---CGCATGTCTGGTGGGGACCACATCCATGCAGGAACCGTAGTC---GGAAAACTCGAA------GGAGAACGAGAAGTCACTTTGGGGTTTGTCGATTTACTTCGTGACGATTATATCGAGAAAGAC---CGGAGTCGTGGTATCTACTTC------ACCCAGGATTGG---GTATCCATGCCA---GGCGTG---ATACCCGTAGCCTCCGGGGGTATACATGTTTGG---------------CACATG------CCCGCACTA---ACAGAAATCTTCGGGGAC---GATTCTGTCCTACAGTTTGGTGGAGGAACTTTGGGGCATCCTTGGGGAAACGCACCGGGCGCTGTTGCTAATCGAGTTGCTCTAGAAGCTTGTGTACAAGCCCGCAATGAAGGACGTGATCTT------------------------------------------------------------------------------------------------------------------------------------------------

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Lygodium japonicum

Basic Information

Taxonomic Information

Photos (5 photos)

Morphological Features

Host Plants (0 host plants)

Quarantine Status (29 records)

Distribution (41 countries)

Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

Genomes (0 records)

Transcriptomes (3 records)

DNA Barcodes (24 records)

Literature

State Information