Passalora sequoiae
TaxID: 706581
Basic Information
Passalora sequoiae
Blight of Cedar
nan
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Dothideomycetes
Mycosphaerellales
Mycosphaerellaceae
Passalora
sequoiae
nan
Species
nan
k__Eukaryota;p__Ascomycota;c__Dothideomycetes;o__Mycosphaerellales;f__Mycosphaerellaceae;g__Passalora;s__Passalora sequoiae
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (6 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_013248845.1 | Contig | 31 | 1272 | 1272 | - |
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ASM1324884v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR25000414 | - | - | - | 30386953 | USA: Mississippi | |
|
PRJNA986660 SRX20756120 SRP445441 fungi RNA-Seq of Passalora sequoiae RNA of four P. sequoiae isolates grown for three to four weeks in PDB was extracted using TRIzol Plus RNA Purification Kit (Invitrogen) following manufacturers protocol. A3 {'host': 'x Hesperotropsis leylandii', 'isolate': 'A3', 'lat_lon': '31.3271 N 89.2903 W', 'env_medium': 'mycelium', 'geo_loc_name': 'USA: Mississippi', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.plant-associated', 'collection_date': '2021', 'env_broad_scale': 'Conifer tree farm', 'env_local_scale': 'Leyland cypress trees', 'host_common_name': 'Leyland Cypress', 'isol_growth_condt': 'Spores isolated from needle cultures on PDA'} |
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| SRR25000413 | - | - | - | 35991999 | USA: Mississippi | |
|
PRJNA986660 SRX20756121 SRP445441 fungi RNA-Seq of Passalora sequoiae RNA of four P. sequoiae isolates grown for three to four weeks in PDB was extracted using TRIzol Plus RNA Purification Kit (Invitrogen) following manufacturers protocol. A4 {'host': 'x Hesperotropsis leylandii', 'isolate': 'A4', 'lat_lon': '31.3271 N 89.2903 W', 'env_medium': 'mycelium', 'geo_loc_name': 'USA: Mississippi', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.plant-associated', 'collection_date': '2021', 'env_broad_scale': 'Conifer tree farm', 'env_local_scale': 'Leyland cypress trees', 'host_common_name': 'Leyland Cypress', 'isol_growth_condt': 'Spores isolated from needle cultures on PDA'} |
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| SRR25000412 | - | - | - | 33843304 | USA: Mississippi | |
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PRJNA986660 SRX20756122 SRP445441 fungi RNA-Seq of Passalora sequoiae RNA of four P. sequoiae isolates grown for three to four weeks in PDB was extracted using TRIzol Plus RNA Purification Kit (Invitrogen) following manufacturers protocol. A7 {'host': 'x Hesperotropsis leylandii', 'isolate': 'A7', 'lat_lon': '31.3271 N 89.2903 W', 'env_medium': 'mycelium', 'geo_loc_name': 'USA: Mississippi', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.plant-associated', 'collection_date': '2021', 'env_broad_scale': 'Conifer tree farm', 'env_local_scale': 'Leyland cypress trees', 'host_common_name': 'Leyland Cypress', 'isol_growth_condt': 'Spores isolated from needle cultures on PDA'} |
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Literature
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