Blakeslea trispora
TaxID: 4850
Basic Information
Blakeslea trispora
Fungus
Blakeslea trispora is a mould and member of the division Zygomycota. This species has been well studied for its ability to produce carotenoids, particularly, -carotene and lycopene. -carotene is a vitamin A precursor and both of -carotene and lycopene play a significant role in the inhibition of oxidative stress. Blakeslea trispora is commonly isolated from soil samples throughout the Southern United States and Southern Asia. B. trispora is a pathogen of tropical plants. In vivo pathogenicity testing using animal models suggests this fungus is not a cause of animal or human disease.
from Wikipedia
Taxonomic Information
Eukaryota
Mucoromycota
Mucoromycetes
Mucorales
Choanephoraceae
Blakeslea
trispora
Undefined
Species
nan
d__Eukaryota;p__Mucoromycota;c__Mucoromycetes;o__Mucorales;f__Choanephoraceae;g__Blakeslea;s__Blakeslea trispora
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Sudan | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_025331445.1 | Contig | 37 | 237 | 237 | - |
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Blatri1 |
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Transcriptomes (6 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR3352652 | - | - | - | 44729895 | China: Beijing | |
|
PRJNA306083 SRX1688680 SRP072728 fungi T36h 1-1 Total RNA → Enrich mRNA by Oligo(dT)→ RNA fragment → Random hexamer primed cDNA synthesis → Size selection and PCR amplication → Illumina sequencing (-) {'strain': '(-)', 'sample_type': 'tissue sample', 'geo_loc_name': 'China: Beijing', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2015-06-01 T21:01:30', 'isolation_source': 'mycelium'} |
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| SRR3352665 | - | - | - | 52529762 | China: Beijing | |
|
PRJNA306083 SRX1688683 SRP072728 fungi C48h 1-2 Total RNA → Enrich mRNA by Oligo(dT)→ RNA fragment → Random hexamer primed cDNA synthesis → Size selection and PCR amplication → Illumina sequencing (-) {'strain': '(-)', 'sample_type': 'tissue sample', 'geo_loc_name': 'China: Beijing', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2015-06-02 T09:00:51', 'isolation_source': 'mycelium'} |
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| SRR3352692 | - | - | - | 43947236 | China: Beijing | |
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PRJNA306083 SRX1688685 SRP072728 fungi T481h 1-2 Total RNA → Enrich mRNA by Oligo(dT)→ RNA fragment → Random hexamer primed cDNA synthesis → Size selection and PCR amplication → Illumina sequencing (-) {'strain': '(-)', 'sample_type': 'tissue sample', 'geo_loc_name': 'China: Beijing', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2015-06-02 T09:01:41', 'isolation_source': 'mycelium'} |
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| SRR3706797 | - | - | - | 27938674 | - | |
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PRJNA326295 SRX1867631 SRP076823 control treated group at 42h control group at 42h {'isolate': 'control group at 42h', 'sample_type': 'cell culture', 'geo_loc_name': 'China', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2015-10-20', 'isolation_source': 'flask culture'} |
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| SRR3706755 | - | - | - | 24391123 | - | |
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PRJNA326295 SRX1867632 SRP076823 control group at 48h control group at 48h {'isolate': 'control group at 48h', 'sample_type': 'cell culture', 'geo_loc_name': 'China', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2015-10-20', 'isolation_source': 'flask culture'} |
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| SRR3706858 | - | - | - | 24871046 | - | |
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PRJNA326295 SRX1867633 SRP076823 control group at 60h control group at 60h {'isolate': 'control group at 60h', 'sample_type': 'cell culture', 'geo_loc_name': 'China', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2015-10-20', 'isolation_source': 'flask culture'} |
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Literature
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