Sparganium
TaxID: 4729
Basic Information
Sparganium
Bur-reed, Burreed
Sparganium (bur-reed) is a genus of flowering plants, described as a genus by Linnaeus in 1753. It is widespread in wet areas in temperate regions of both the Northern and Southern Hemispheres. The plants are perennial marsh plants that can grow to 3.5 m (depending on the species), with epicene flowers. It was previously placed alone in the family Sparganiaceae. Sparganium is closely related to the Typhaceae and the APG III system (2009) includes Sparganium in that family. It has been determined from phylogenetic analysis to be the closest living relative of the genus Typha (cat-tail).
from Wikipedia
Taxonomic Information
Eukaryota
Streptophyta
Magnoliopsida
Poales
Typhaceae
Sparganium
nan
nan
Genus
nan
k__Eukaryota;p__Streptophyta;c__Magnoliopsida;o__Poales;f__Typhaceae;g__Sparganium;s__unclassified
nan
Weeds
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| United States of America | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (0 records)
Data source: NCBI.
No genome records available.
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR25030137 | rhizoma | In December, developed rhizoma | - | 68742283 | China: Jiangsu, Nanjing | |
|
PRJNA987745 SRX20785194 SRP445879 general Rhizoma Rhizoma tissue {'tissue': 'rhizoma', 'ecotype': 'China: Jiangsu: Nanjing', 'dev_stage': 'In December, developed rhizoma', 'geo_loc_name': 'China: Jiangsu, Nanjing', 'biosamplemodel': 'Plant', 'collection_date': '2021-12-30'} |
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| SRR25030136 | rhizoma | In October, undeveloped rhizoma | - | 80592057 | China: Jiangsu, Nanjing | |
|
PRJNA987745 SRX20785195 SRP445879 general Rhizoma Rhizoma tissue {'tissue': 'rhizoma', 'ecotype': 'China: Jiangsu: Nanjing', 'dev_stage': 'In October, undeveloped rhizoma', 'geo_loc_name': 'China: Jiangsu, Nanjing', 'biosamplemodel': 'Plant', 'collection_date': '2021-10-14'} |
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| ERR15696449 | - | - | hermaphrodite and monoecious | 44535317 | - | |
|
PRJEB81096 ERX15100567 ERP164957 general Illumina NovaSeq X paired end sequencing Illumina sequencing of sample accession SAMEA114788038 for study accession PRJEB81096. This submission includes reads tagged with the sequence GGTATGCA. {'gal': 'Royal Botanic Garden Edinburgh', 'sex': 'hermaphrodite and monoecious', 'tolid': 'lpSpaEmer1', 'habitat': 'in reservoir', 'lifestage': 'sporophyte', 'broker name': 'COPO', 'external id': 'SAMEA114788038', 'sample name': '65671f1f858acb60effeb46f', 'specimen_id': 'EDTOL05749', 'collected_by': 'MARKUS RUHSAM', 'insdc status': 'public', 'project name': 'DTOL', 'submitter id': '65671f1f858acb60effeb46f', 'gal_sample_id': 'EDTOL05749', 'identified_by': 'MARKUS RUHSAM', 'organism part': 'LEAF', 'collection date': '2023-08-10', 'ena-last-update': '2023-12-04T16:35:00Z', 'scientific_name': 'Sparganium emersum', 'barcoding center': 'ROYAL BOTANIC GARDEN EDINBURGH', 'ena-first-public': '2023-12-04T16:35:00Z', 'specimen_voucher': 'NOT PROVIDED', 'insdc center name': 'EarlhamInstitute', 'insdc last update': '2023-12-04T16:35:00Z', 'insdc first public': '2023-12-04T16:35:00Z', 'sample derived from': 'SAMEA114782675', 'collecting institution': 'ROYAL BOTANIC GARDEN EDINBURGH', 'identifier_affiliation': 'ROYAL BOTANIC GARDEN EDINBURGH', 'voucher institution url': 'https://ror.org/0349vqz63', 'geographic location (latitude)': '55.870924', 'geographic location (longitude)': '-3.3116573', 'sample collection device or method': 'leaves were cut and put into FluidX tubes', 'geographic location (country and/or sea)': 'United Kingdom', 'geographic location (region and locality)': 'Harlaw reservoir'} |
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Literature
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