Porotermes quadricollis
TaxID: 377978
Scientific Name *
Porotermes quadricollis
Common Name
Andes Dampwood Termite
Introduction
Details
nan
from Wikipedia
Details
Lineage
k__Eukaryota;p__Arthropoda;c__Insecta;o__Blattodea;f__Termopsidae;g__Porotermes;s__Porotermes quadricollis
(5 photos)
Details
c
c
c
c
c
(0 host plants)
Data sources: EPPO Global Database and relevant literature.
(2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
(2 countries)
Data Sources: EPPO Global Database and GBIF.
(Latitude and longitude coordinates sourced from GBIF.)
(0 records)
Data source: NCBI.
No genome records available.
(1 records)
Data source: NCBI.
Run ID
Tissue
Developmental Stage
Sex
Read Count
Location
Actions
SRR9968577
head
-
-
17722719
Chile
Title
RNA-Seq of Porotermes_quadricollis:head from worker
Design Description
Termites were collected in RNA-later. Each sample was temporarily stored in the field at temperature varying between -20C and 4C, and then kept at -80C until RNA extraction. We dissected with a scalpel the heads of 2 to 15 individuals, predominantly workers, and transferred them in 400 l of TRIzol Reagent (Invitrogen). Heads were homogenized using a Fisherbrand Disposable Pestle System (Fisher Scientific). We extracted total RNA using a standard phenol-chloroform procedure with TRIzol according to manufacturers protocol. Extracted RNA samples were treated with TURBO DNase (Ambion) at 37C for 1h, and purified using the RNA Clean & Concentrator-5 kit (Zymo Research). RNA samples were poly(A)+ enriched and fragmented.
Sample Attributes
{'tissue': 'head', 'isolate': 'worker', 'geo_loc_name': 'Chile', 'biosamplemodel': 'Invertebrate'}
Data source: BOLD.
Process ID
BIN
Marker
Length
Country
Date
Lat/Lon
Sequence
GBAAZ8789-24
-
COI-5P
1539
Unrecoverable
-
-
ATTATTCAACGATGGATATTTTCAACCAATCACAAAGACATTGGCACCCTATACTTTATTTTTGGGGCATGAGCAGGCATAGTAGGAACATCCCTAAGAATATTAATTCGTACAGAATTAGGCCAACCGGGGTCCCTAATTGGAGATGATCAAGTTTATAACGTAATTGTAACAGCACACGCATTTGTTATGATTTTCTTTATAGTAATACCAATTATAATTGGAGGGTTCGGAAACTGGTTAGTCCCGCTAATACTAGGGGCACCAGATATGGCTTTTCCACGAATAAACAATATAAGATTCTGACTATTACCACCGTCACTTACATTACTATTAACCAGAAGAATAGTGGAAAGAGGTGCTGGAACAGGATGAACTGTATATCCTCCTCTTGCAAGAGGGATTGCCCATGCGGGAGCATCTGTAGATCTAGCAATTTTCTCATTACATTTAGCTGGTGTATCATCGATTCTTGGGGCAGTAAATTTCATCTCAACAACCATCAATATAAAACCAATAAGCATAAAACCAGAACGAATCCCCCTATTTGTATGAGCAGTAGCCATCACAGCCCTACTGCTACTCCTATCACTACCGGTTCTCGCAGGAGCCATCACTATATTACTCACTGACCGTAACCTAAATACATCATTTTTCGACCCGGCGGGTGGTGGGGACCCAATTCTGTATCAACATCTATTTTGATTCTTCGGACACCCAGAAGTGTATATCTTAATTTTACCAGGATTTGGTATAATTTCTCATATCATTTGCCACGAAAGAGGTAAAAAGGAAGCATTCGGTAATCTAGGAATAATCTTTGCAATAATAGCAATTGGGCTACTTGGATTCGTGGTATGAGCACACCATATATTCACTGTAGGAATAGATGTCGATACACGAGCCTACTTCACATCAGCTACAATAATCATTGCTGTACCTACAGGGATCAAAATCTTCAGATGACTAGCAACATTATATGGATCACAACTAACATATAGAGCAGCAAGCCTATGATCAATAGGATTTGTATTCCTGTTCACAATGGGGGGACTAACAGGGGTAGTATTAGCAAACTCATCAATTGATATCATCCTGCACGACACATACTATGTAGTCGCACATTTTCACTATGTTCTATCAATAGGAGCAGTATTTGCAATCATAGCAGGATTCGTTCAATGATACCCCTTATTTACAGGGTTAACCATAAATCCAAAATGACTAAAAACACAGTTCACCGTAATATTTGCCGGGGTTAACCTAACATTCTTCCCACAACACTTCCTAGGGCTAGCTGGAATGCCACGACGATATTCAGATTATCCAGATGCCTTCACAGCATGAAATATTATTTCATCAATTGGATCAATAATCTCATTTGTTAGAGTGATAATATTCATCTTTATCATCTGAGAGAGAATAGGATCTAACCGACAGATCCTATTCTCCACACAAACTCCAAATTCAATTGAATGATTACAAAATACGCCCCCGCCAGAACACAGATACTCCGAATTACCGACAATTACCAATTAA
GBAAZ8788-24
-
COI-5P
1539
Unrecoverable
-
-
ATTATTCAACGATGGATATTTTCAACCAATCACAAAGACATTGGCACCCTATACTTTATTTTTGGGGCATGAGCAGGCATAGTAGGAACATCCCTAAGAATATTAATTCGTACAGAATTAGGCCAACCGGGGTCCCTAATTGGAGATGATCAAGTTTATAACGTAATTGTAACAGCACACGCATTTGTTATGATTTTCTTTATAGTAATACCAATTATAATTGGAGGGTTCGGAAACTGGTTAGTCCCGCTAATACTAGGGGCACCAGATATGGCTTTTCCACGAATAAACAATATAAGATTCTGACTATTACCACCGTCACTTACATTACTATTAACCAGAAGAATAGTGGAAAGAGGTGCTGGAACAGGATGAACTGTATATCCTCCTCTTGCAAGAGGGATTGCCCATGCGGGAGCATCTGTAGATCTAGCAATTTTCTCATTACATTTAGCTGGTGTATCATCGATTCTTGGGGCAGTAAATTTCATCTCAACAACCATCAATATAAAACCAATAAGCATAAAACCAGAACGAATCCCCCTATTTGTATGAGCAGTAGCCATCACAGCCCTACTGCTACTCCTATCACTACCGGTTCTCGCAGGAGCCATCACTATATTACTCACTGACCGTAACCTAAATACATCATTTTTCGACCCGGCGGGTGGTGGGGACCCAATTCTGTATCAACATCTATTTTGATTCTTCGGACACCCAGAAGTGTATATCTTAATTTTACCAGGATTTGGTATAATTTCTCATATCATTTGCCACGAAAGAGGTAAAAAGGAAGCATTCGGTAATCTAGGAATAATCTTTGCAATAATAGCAATTGGGCTACTTGGATTCGTGGTATGAGCACACCATATATTCACTGTAGGAATAGATGTCGATACACGAGCCTACTTCACATCAGCTACAATAATCATTGCTGTACCTACAGGGATCAAAATCTTCAGATGACTAGCAACATTATATGGATCACAACTAACATATAGAGCAGCAAGCCTATGATCAATAGGATTTGTATTCCTGTTCACAATGGGGGGACTAACAGGGGTAGTATTAGCAAACTCATCAATTGATATCATCCTGCACGACACATACTATGTAGTCGCACATTTTCACTATGTTCTATCAATAGGAGCAGTATTTGCAATCATAGCAGGATTCGTTCAATGATACCCCTTATTTACAGGGTTAACCATAAATCCAAAATGACTAAAAACACAGTTCACCGTAATATTTGCCGGGGTTAACCTAACATTCTTCCCACAACACTTCCTAGGGCTAGCTGGAATGCCACGACGATATTCAGATTATCCAGATGCCTTCACAGCATGAAATATTATTTCATCAATTGGATCAATAATCTCATTTGTTAGAGTGATAATATTCATCTTTATCATCTGAGAGAGAATAGGATCTAACCGACAGATCCTATTCTCCACACAAACTCCAAATTCAATTGAATGATTACAAAATACGCCCCCGCCAGAACACAGATACTCCGAATTACCGACAATTACCAATTAA
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