Neoscytalidium dimidiatum
TaxID: 108428
Basic Information
Neoscytalidium dimidiatum
Storage Rot
Neoscytalidium dimidiatum was first described in 1933 as Hendersonula toruloidea from diseased orchard trees in Egypt. Decades later, it was determined to be a causative agent of human dermatomycosis-like infections and foot infections predominantly in tropical areas; however the fungus is considered to be widespread. A newer name, Scytalidium dimidiatum, was applied to a synanamorph of Nattrassia mangiferae, otherwise known as Neofusicoccum mangiferae. Substantial confusion has arisen in the literature on this fungus resulting from the use of multiple different names including Torula dimidiata, Fusicoccum dimidiatum, Scytalidium dimidiatum, and Hendersonula toruloidea. Additionally, Scytalidium lignicola and Scytalidium lignicolum are often considered earlier names of N. dimidiatum.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Dothideomycetes
Botryosphaeriales
Botryosphaeriaceae
Neoscytalidium
dimidiatum
nan
Species
nan
k__Eukaryota;p__Ascomycota;c__Dothideomycetes;o__Botryosphaeriales;f__Botryosphaeriaceae;g__Neoscytalidium;s__Neoscytalidium dimidiatum
nan
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (4 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Egypt | Present | 2018 |
| Mexico | Quarantine pests | 2018 |
| Nicaragua | Absent | — |
| United States of America | Quarantine pests | — |
Distribution (14 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| Colombia | Present | — |
| Egypt | Present | — |
| France | Present | — |
| India | Present | — |
| Iran | Present | — |
| Iraq | Present | — |
| Italy | Present | — |
| Mexico | Present | — |
| Mali | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_037367355.1 | Chromosome | 43 | 1968 | 3925 | - |
|
|
|
ASM3736735v1 |
|||||||
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR32640131 | - | - | - | 72658892 | China: Guangxi | |
|
PRJNA1234315 SRX27944650 SRP569435 fungi Transcriptome of BH5 during infection The Illumina NovaSeq Reagent Kit was used to construct sequencing libraries, and sequencing was performed on the Illumina Nova6000 platform. BH5 {'strain': 'BH5', 'lat_lon': '22.85 N 108.25 E', 'collected_by': 'Shanyu Lin', 'geo_loc_name': 'China: Guangxi', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2022', 'isolation_source': 'Pitaya tissue'} |
||||||
| SRR32640130 | - | - | - | 69672625 | China: Guangxi | |
|
PRJNA1234315 SRX27944651 SRP569435 fungi Transcriptome of BH5 during infection The Illumina NovaSeq Reagent Kit was used to construct sequencing libraries, and sequencing was performed on the Illumina Nova6000 platform. BH5 {'strain': 'BH5', 'lat_lon': '22.85 N 108.25 E', 'collected_by': 'Shanyu Lin', 'geo_loc_name': 'China: Guangxi', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2022', 'isolation_source': 'Pitaya tissue'} |
||||||
| SRR32640129 | - | - | - | 69187192 | China: Guangxi | |
|
PRJNA1234315 SRX27944652 SRP569435 fungi Transcriptome of BH5 during infection The Illumina NovaSeq Reagent Kit was used to construct sequencing libraries, and sequencing was performed on the Illumina Nova6000 platform. BH5 {'strain': 'BH5', 'lat_lon': '22.85 N 108.25 E', 'collected_by': 'Shanyu Lin', 'geo_loc_name': 'China: Guangxi', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2022', 'isolation_source': 'Pitaya tissue'} |
||||||
DNA Barcodes (65 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| ITSIM2127-15 | - | ITS | 570 | Australia | - | -31.953, 115.86 | |
| ITSIM2126-15 | - | ITS | 570 | Australia | - | -33.34, 116.74 | |
| ITSIM2125-15 | - | ITS | 570 | Australia | - | -31.953, 115.86 | |
| ITSIM2124-15 | - | ITS | 577 | Australia | - | -31.953, 115.86 | |
| ITSIM2123-15 | - | ITS | 576 | Australia | - | -31.953, 115.86 | |
| ITSIM2122-15 | - | ITS | 578 | Australia | - | -31.953, 115.86 | |
| ITSIM2121-15 | - | ITS | 577 | Australia | - | -31.953, 115.86 | |
| ITSIM2120-15 | - | ITS | 577 | Australia | - | -31.953, 115.86 | |
| ITSIM2119-15 | - | ITS | 578 | France | - | 48.857, 2.351 | |
| GBBOT944-13 | - | ITS | 942 | - | - | - |
Literature
Fetching literature from NCBI PubMed...
Failed to fetch literature