Silene noctiflora

TaxID: 39899

Basic Information

Scientific Name *

Silene noctiflora

Common Name

Acker-Leimkraut, Night-flowering Catchfly, night-flowering catchfly

Introduction

Silene noctiflora is a species of flowering plant in the family Caryophyllaceae known by the common names night-flowering catchfly, nightflowering silene and clammy cockle. It is native to Eurasia, but it is known on other continents as an introduced species and sometimes a weed. In North America, it is a common weed of grain crops in the Canadian prairie provinces and in much of the United States. It grows in fields and in other disturbed habitat.

from Wikipedia

Taxonomic Information

Domain/Kingdom

Eukaryota

Phylum

Streptophyta

Class

Magnoliopsida

Order

Caryophyllales

Family

Caryophyllaceae

Genus

Silene

Species

noctiflora

Subspecies

nan

Photos (5 photos)

c

Morphological Features

No morphological description available.

Host Plants (0 host plants)

Data sources: EPPO Global Database and relevant literature.

No host plants available.

Quarantine Status (1 records)

Data sources: IPPC website and national quarantine websites; verified by human review.

Country	Status	Year Added
Mexico	Quarantine pests	2018

Distribution (50 countries)

Data Sources: EPPO Global Database and GBIF.

50

Present

0

Absent

0

Unknown/Other

Country	Status	State
Armenia	Present	—
Australia	Present	—
Austria	Present	—
Azerbaijan	Present	—
Belgium	Present	—
Bulgaria	Present	—
Bosnia and Herzegovina	Present	—
Belarus	Present	—
Canada	Present	—
Switzerland	Present	—

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Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

Download CSV

Genomes (1 records)

Data source: NCBI.

Assembly Accession	Assembly Level	Genome Size(Mb)	Contig N50(Kb)	Scaffold N50(Kb)	BUSCO%	Downloads	Actions
GCA_009801015.1	Scaffold	2598	2	59	-	FASTA
Assembly Name ASM980101v1

Transcriptomes (3 records)

Data source: NCBI.

Run ID	Tissue	Developmental Stage	Sex	Read Count	Location	Actions
SRR13588461	Leaf and stem	-	-	5733497	USA:Colorado	Download NCBI
BioProject PRJNA698234 Experiment ID SRX9983126 Study ID SRP303941 Category weed Title tRNA-seq of total cellular RNA from Silene noctiflora Design Description AlkB treatment and YAMAT-Seq Strain Replicate 1 Sample Attributes {'age': '14 weeks', 'tissue': 'Leaf and stem', 'ecotype': 'BRP', 'isolate': 'Replicate 1', 'replicate': 'Noctiflora total cellular 1', 'geo_loc_name': 'USA:Colorado', 'biosamplemodel': 'Plant'}
SRR13588459	Leaf and stem	-	-	9634868	USA:Colorado	Download NCBI
BioProject PRJNA698234 Experiment ID SRX9983128 Study ID SRP303941 Category weed Title tRNA-seq of total cellular RNA from Silene noctiflora Design Description AlkB treatment and YAMAT-Seq Strain Replicate 2 Sample Attributes {'age': '14 weeks', 'tissue': 'Leaf and stem', 'ecotype': 'BRP', 'isolate': 'Replicate 2', 'replicate': 'Noctiflora total cellular 2', 'geo_loc_name': 'USA:Colorado', 'biosamplemodel': 'Plant'}
SRR13588458	Leaf and stem	-	-	11251841	USA:Colorado	Download NCBI
BioProject PRJNA698234 Experiment ID SRX9983129 Study ID SRP303941 Category weed Title tRNA-seq of total cellular RNA from Silene noctiflora Design Description AlkB treatment and YAMAT-Seq Strain Replicate 3 Sample Attributes {'age': '14 weeks', 'tissue': 'Leaf and stem', 'ecotype': 'BRP', 'isolate': 'Replicate 3', 'replicate': 'Noctiflora total cellular 3', 'geo_loc_name': 'USA:Colorado', 'biosamplemodel': 'Plant'}

DNA Barcodes (31 records)

View all

Data source: BOLD.

Process ID	BIN	Marker	Length	Country	Date	Lat/Lon	Sequence
POWNA682-10	-	rbcL	542	United Kingdom	2002-09-20	52.439457, -4.042631	AAGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAAATTGACTTATTATACTCCTGAGTATGAAACCCTGGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCCGGAGTTCCACCCGAAGAAGCAGGGGCCGCAGTAGCCGCCGAATCTTCTACGGGTACATGGACAACTGTATGGACCGACGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTACCACATCGAGCCTGTTGCTGGAGAAGAAAATCAATATATTTGTTATGTAGCTTACCCCTTAGACCTTTTTGAGGAAGGCTCGGTTACGAACATGTTTACTTCCATTGTGGGTAATGTATTTGGGTTCAAAGCCTTGCGTGCTCTACGTTTGGAGGATTTGCGAATCCCTGTTGCTTATGTAAAAACTTTCCTAGGCCCACCTCACGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGTCGTCCCCTATTGGGATGCACTATTAAACCTAAATTGGGGTTATCTGCTAAAAACTATGGTCGAGCAGTTT
POWNA682-10	-	matK	699	United Kingdom	2002-09-20	52.439457, -4.042631	AGATGCCGCGTCTTTACATTTATTACGATTATTTCTTTATGAGTATCATAATTGGAATAGTCTTTTTATTCCAAAAAAATCCATTTCTTTTTTTTTTAAAAGGAATCAAAGATTATTCTTGTTCTTATATAATTTCCATGTATGTGAATACGAATCTATTTTATTTTTTATTTGCAACCAATCCTCTCATTTACGAGCAACATCTTATGGAATCCTTCTTGAACGCACTTTGTTCTACGGAAAATTAGAATACTTAGTCAAACTTTTGACTAAGGATTTTGCCGGTATCCTATGGCTTTTCAAGGATCCTTCCCCGCACTCTGTTAGGTATAAAGGCAAATCCATTCTGGCCTCAAAAGGGACATTCTTTTTGATGCATAAATGGAAATTTTACCTTATTAATTTCTGGCAATGTCATTTTTCTGTGTGGTCTCATCCAAGACGAATCTATATTAATCGATTATCAACCCATTGTCTTGACTTTATTGGTTTTCTTTCAAGTGTCCAACTCACTTCTTCAGTGGTACGGAGTCAAATATTCGAAAATGCATTTCTAATAGATAATACGATTAAGAGGTTCGATCCGAAAATCCCAATTAGTACTCTGATTGGATCGTTAGCTAAAGCGCAATTTTGTAACCGATTAGGACATCCTATTAGTAAGTCGGTCTGGATCGATTTATCGGATTCGGATATTAT
POWNA1711-12	-	rbcL	542	United Kingdom	1988-08-12	53.256573, -3.8017700000000003	AAGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAAATTGACTTATTATACTCCTGAGTATGAAACCCTGGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCCGGAGTTCCACCCGAAGAAGCAGGGGCCGCAGTAGCCGCCGAATCTTCTACGGGTACATGGACAACTGTATGGACCGACGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTACCACATCGAGCCTGTTGCTGGAGAAGAAAATCAATATATTTGTTATGTAGCTTACCCCTTAGACCTTTTTGAGGAAGGCTCGGTTACGAACATGTTTACTTCCATTGTGGGTAATGTATTTGGGTTCAAAGCCTTGCGTGCTCTACGTTTGGAGGATTTGCGAATCCCTGTTGCTTATGTAAAAACTTTCCTAGGCCCACCTCACGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGTCGTCCCCTATTGGGATGCACTATTAAACCTAAATTGGGGTTATCTGCTAAAAACTATGGTCGAGCAGTTT
POWNA1711-12	-	matK	729	United Kingdom	1988-08-12	53.256573, -3.8017700000000003	ACGATTATTTCTTTATGAGTATCATAATTGGAATAGTCTTTTTATTCCAAAAAAATCCATTTCTTTTTTTTTTAAAAGGAATCAAAGATTATTCTTGTTCTTATATAATTTCCATGTATGTGAATACGAATCTATTTTATTTTTTATTTGCAACCAATCCTCTCATTTACGAGCAACATCTTATGGAATCCTTCTTGAACGCACTTTGTTCTACGGAAAATTAGAATACTTAGTCAAACTTTTGACTAAGGATTTTGCCGGTATCCTATGGCTTTTCAAGGATCCTTCCCCGCACTCTGTTAGGTATAAAGGCAAATCCATTCTGGCCTCAAAAGGGACATTCTTTTTGATGCATAAATGGAAATTTTACCTTATTAATTTCTGGCAATGTCATTTTTCTGTGTGGTCTCATCCAAGACGAATCTATATTAATCGATTATCAACCCATTGTCTTGACTTTATTGGTTTTCTTTCAAGTGTCCAACTCACTTCTTCAGTGGTACGGAGTCAAATATTCGAAAATGCATTTCTAATAGATAATACGATTAAGAGGTTCGATCCGAAAATCCCAATTAGTACTCTGATTGGATCGTTAGCTAAAGCGCAATTTTGTAACCGATTAGGACATCCTATTAGTAAGTCGGTCTGGATCGATTTATCGGATTCGGATATTATTGATCGATTTGGGCGCATATGCCGAAATCTTTCTCATTATTATAGCGGCTCTTC
POWNA1711-12	-	ITS2	447	United Kingdom	1988-08-12	53.256573, -3.8017700000000003	TGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCT---TC--GGCTGAGGGCACGTC-TGCCT---GGGCGTCACGCATCGC----GTCTCCCCCA---AA----TCC---ACCA---------CGAGTGGAGGG------------------GAAGGAGGA---TGGTTT--CCCGCGACTCACCG-------------------GTCGCGGCTGGCCTAAAA---TTGGAGCC-CTCGGCATCGGGATGCCGCGGCGATAG---GTGGTGAACAAGGCC--TCGGCCAAGCAAGCAA---C--------CCGTCG--------CG-CGTCCC------------CGTGCCAACGTGAGCTCGAAGGACCCTTT-GATG----------TTGCCTT------GTTGCAAC-C-----AAACCGTTGCGA-CCCCAGGTCAGGCGGGGCT-ACCCGCTGAATTTAAGCATATCAATAAGCGGAGGAAAA-GAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACC-GGGAATA--GCCCAGCTT-TAAAATCGGGCGGCTTT---GCCGTCCGA
PNOR1683-18	-	rbcLa	1428	Finland	1986-08-06	65.01579, 25.657385	atgtcaccacaaacagagactaaagcaagtgttggatttaaagctggtgttaaagattacaaattgacttattatactcctgagtatgaaaccctggatactgatatcttggcagcattccgagtaactcctcaacccggagttccacccgaagaagcaggggccgcagtagccgccgaatcttctacgggtacatggacaactgtatggaccgacggacttaccagtcttgatcgttacaaaggacgatgctaccacatcgagcctgttgctggagaagaaaatcaatatatttgttatgtagcttaccccttagacctttttgaggaaggctcggttacgaacatgtttacttccattgtgggtaatgtatttgggttcaaagccttgcgtgctctacgtttggaggatttgcgaatccctgttgcttatgtaaaaactttcctaggcccacctcacggtatccaagttgaaagagataaattgaacaagtatggtcgtcccctattgggatgcactattaaacctaaattggggttatctgctaaaaactatggtcgagcagtttatgaatgtcttcgcggtggacttgattttaccaaagatgatgaaaacgtgaactcccaaccatttatgcgttggagagaccgcttcttattttgtgccgaagcaatttataaagcacaggctgaaacaggtgaaatcaaagggcattacttgaatgccactgcgggtacatgtgaagaaatgatcaaaagggctgtatttgccagagaattgggagttcctatcgtaatgcatgactacttaacaggtggattcactgcaaatactagcttggcccattattgccgagataatggtctacttcttcacatacaccgtgcaatgcacgccgttattgatagacagaaaaatcatggtatgcacttccgtgtactagctaaagcgttacgtctgtctggtggagatcatattcatgccggtaccgtagtaggtaagcttgaaggggaaagagaaatcaccttaggctttgtggatttactacgtgatgattttactgaaaaagacagaagtcgcggtatttatttcactcaatcatgggtttctacaccaggtgttctgcccgttgcttcgggaggtattcacgtttggcatatgcccgctctaaccgagatctttggagatgattccgtactacagtttggtggaggaaccctaggacatccttggggtaatgcgccaggtgctgtagcgaatcgagtagccctagaagcatgtgtacaagctcgtaatgaaggacgtgatcttgctcgcgagggtaatactattattcgtgaggcttgcaaatggagtcctgagctagctgctgcttgtgaagtatggaaggaaattaaatttgaattccaagcaatggatacaatctaa
PNOR1683-18	-	matK	1512	Finland	1986-08-06	65.01579, 25.657385	atggaggaattccaaggatatctagaactagagggttcttggcaacacaactttttctatccacttatctttcaggaatatcttttttcgtttgcatatggtcatgatttaaataaatctattttgttggaaacttcaggtaataggaaatatagtttactaattgtgaaacgtttaattactcgaatggatcaacataatcatttgattctttcgtctaacgattctaaccaaaatgacttttgggggcacaaacgcaatttttattctcaaatgctatcagaaggcttttcagtcattgtggaaattccattttatcttctattaatagcttctccagagaaacaaaaaatagtcaaatctcataatttgagatcaattcattcaatatttccttttttagaggacaaatttttacatttaaattctgtgttagatatattaataccttaccccgctcatctagaaatcttggttcaaacacttcggtactggataagagatgccgcgtctttacatttattacgattatttctttatgagtatcataattggaatagtctttttattccaaaaaaatccatttctttttttttaaaaaggaatcaaagattattcttgttcttatataatttccatgtatgtgaatacgaatctattttattttttatttgcaaccaatcctctcatttacgagcaacatcttatggaatccttcttgaacgcactttgttctacggaaaattagaatacttagtcaaacttttgactaaggattttgccggtatcctatggcttttcaaggatccttccccgcactctgttaggtataaaggcaaatccattctggcctcaaaagggacattctttttgatgcataaatggaaattttaccttattaatttctggcaatgtcatttttctgtgtggtctcatccaagacgaatctatattaatcgattatcaacccattgtcttgactttattggttttctttcaagtgtccaactcacttcttcagtggtacggagtcaaatattcgaaaatgcatttctaatagataatacgattaagaggttcgatccgaaaatcccaattagtactctgattggatcgttagctaaagcgcaattttgtaaccgattaggacatcctattagtaagtcggtctggatcgatttatcggattcggatattattgatcgatttgggcgcatatgccgaaatctttctcattattatagcggctcttcaaaaaaaaagagtttgtatcgattaaagtatatacttaaaatttcttgtgctagaactttggctcgtaaacacaaaagtgctgtgcgtgcttttttgaaaagattaggttcagaatttttagaagaattctttacggagcaagaaaaagtgctttccttgatcttaccaaaaaacggctctaactcgcggggattctatggagggtctatttggtatttggatattatttgtattcataatttggctaatgatgaatga
PLNOR138-08	-	rbcLa	552	Canada	2007-07-18	42.737, -80.419	AGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAAATTGACTTATTATACTCCTGAGTATGAAACCCTAGATACTGATATCTTGGCAGCATTCCGAGTAAGTCCTCAACCCGGAGTTCCACCCGAAGAAGCAGGGGCCGCAGTAGCCGCCGAATCTTCTACGGGTACATGGACAACTGTATGGACCGACGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTACCACATCGAGCCTGTTGCTGGAGAAGAAAATCAATATATTTGTTATGTAGCTTACCCCTTAGACCTTTTTGAGGAAGGCTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGGTTCAAAGCCTTGCGTGCTCTACGTTTGGAGGATTTGCGAATCCCTATTGCTTATGTAAAAACTTTCCTAGGCCCGCCTCACGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGCCGTCCCCTATTGGGATGCACTATTAAACCTAAATTGGGGTTATCTGCTAAAAACTATGGTCGAGCAGTTTATGAATGTCTT
PLNOR138-08	-	matK	777	Canada	2007-07-18	42.737, -80.419	TCGTCTTTGCATTTATTACGCTTATTTCTTTATGAGTATCATAAT------TGGAAT------------------------AGTCTTTTTATTCCAAAAAAATCCATTTATTTTTTTTTTAAAAGG------------AATCAAAGATTATTCTTGTTCTTATATAATTTCCATGTATGTGAATACGAATCAATTTTATTTTTTATTTGCAAC---CAATCCTCTCATTTACGAGCAACATCTTATGGAGCCCTTCTTGAACGCACCTTTTTCTACGGAAAA------TTAGAATACTTAGTAAAA---------------CTTTTT------ACTAAGGATTTTGCCGGTATC------CTATGGCTTTTCAAG------GATCCTTCCCCGCATTCTGTTAGGTATAAAGGAAAATCCATTCTGGCCTCAAAAGGGACATTCTTTTTGATGCATAAATGGAAATTTTACCTTATTTATTTCTGGCAATGTAATTTTTCTGTGTGGTCTCACCCA------AGAAGAATCTATATTAAT---------CGATTATCAACC---------CATTGTCTTGACTTTATTGGTTTTTTTTCAAGT---------GTACAACTCACTTCTTCAGTTGTACGGAGTCAAATATTAGAAAATACATTTCTAATAGATAATACGATT------AAGAGGTTCGATCCGAAAATCCCAATTAGTACTCTGATTGGATCGTTAGCTAAAGCGCAATTTTGTAACCGATTAGGACATCCTATTAGTAAGTCGGTCTGGATCGATTTATCGGATTCGGACATTATTGATCGATTTGGGCGCATATGCAGAAATCTTTCTCATTATTATAGTGGCTCTTCAAGAAAAAAGAGTTTGTATCGATTAAAGTAT----
NLFLM1776-16	-	matK	834	Netherlands	2012-06-29	51.86, 5.89	AAACACTTCGGTACTGGATAAGAGATGCCGCGTCTTTACATTTATTACGATTATTTCTTTATGAGTATCATAATTGGAATAGTCTTTTTATTCCAAAAAAATCCATTTCTTTTTTTTTTAAAAGGAATCAAAGATTATTCTTGTTCTTATATAATTTCCATGTATGTGAATACGAATCTATTTTATTTTTTATTTGCAACCAATCCTCTCATTTACGAGCAACATCTTATGGAATCCTTCTTGAACGCACTTTGTTCTACGGAAAATTAGAATACTTAGTCAAACTTTTGACTAAGGATTTTGCCGGTATCCTATGGCTTTTCAAGGATCCTTCCCCCCACTCTGTTAGGTATAAAGGCAAATCCATTCTGGCCTCAAAAGGGACATTCTTTTTGATGCATAAATGGAAATTTTACCTTATTAATTTCTGGCAATGTCATTTTTCTGTGTGGTCTCATCCAAGACGAATCTATATTAATCGATTATCAACCCATTGTCTTGACTTTATTGGTTTTCTTTCAAGTGTCCAACTCACTTCTTCAGTGGTACGGAGTCAAATATTCGAAAATGCATTTCTAATAGATAATACGATTAAGAGGTTCGATCCGAAAATCCCAATTAGTACTCTGATTGGATCGTTAGCTAAAGCGCAATTTTGTAACCGATTAGGACATCCTATTAGTAAGTCGGTCTGGATCGATTTATCGGATTCGGATATTATTGATCGATTTGGGCGCATATGCCGAAATCTTTCTCATTATTATAGCGGCTCTTCAAAAAAAAAGAGTTTGTATCGATTAAAGTATATACTTAAAATTTCTTGTGCTAGAACTT

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Silene noctiflora

Basic Information

Taxonomic Information

Photos (5 photos)

Morphological Features

Host Plants (0 host plants)

Quarantine Status (1 records)

Distribution (50 countries)

Distribution Map (Latitude and longitude coordinates sourced from GBIF.)

Genomes (1 records)

Transcriptomes (3 records)

DNA Barcodes (31 records)

Literature

State Information